Gene Ppha_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0301 
SymbolrplE 
ID6461181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp293633 
End bp294220 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content43% 
IMG OID642726593 
Product50S ribosomal protein L5 
Protein accessionYP_002017251 
Protein GI194335457 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.433186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGA ATAAAGAGAT GACACCGACA ACACCTTCAC TGGCAAGACT TGAAACATTC 
TTTAAAGAGA AAGTAACTCC CAATCTTGTC GAGCGCTTTC AGTACAAGAA TGCCATGCTG 
GTACCGAAGC TTAAAAAAAT ATCGATCAAT ATCGGTGTAG GTGCTGCAGC GGCAGAACCA 
AAACTGCTTG AAATTGCTCT TCAGGAGCTT GCCCAGATTA CAGGTCAGAA ACCCCAGATC 
CGTAAATCAA AAAAAGCAAT ATCAAACTTT AAATTACGCG AAGGCCAGGC TATAGGTTGC 
CGCGTAACGT TACGCCGCAA GGCCATGTAC GAGTTTTTTG ATCGTTTTGT CAGTCTTGCC 
GTTCCAAGAA TACGTGATTT CCGTGGGCTC AGCGATACCA GTTTCGATGG CCGTGGAAAC 
TATACCGTTG GAGTCAGGGA GCAGATTATA TTTCCGGAAA TCGATATTGA CAAAGTACCG 
AGAATATCCG GAATGGATAT CAGTTTTGTA ACTTCAGCTT CGACAGATGA AGAGGCTTAT 
GTACTGCTCT CGGAACTTGG AATGCCATTC AAAAAGAAGA ACAACTAA
 
Protein sequence
MDKNKEMTPT TPSLARLETF FKEKVTPNLV ERFQYKNAML VPKLKKISIN IGVGAAAAEP 
KLLEIALQEL AQITGQKPQI RKSKKAISNF KLREGQAIGC RVTLRRKAMY EFFDRFVSLA 
VPRIRDFRGL SDTSFDGRGN YTVGVREQII FPEIDIDKVP RISGMDISFV TSASTDEEAY 
VLLSELGMPF KKKNN