| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0295 |
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| Symbol | rpsC |
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| ID | 6461882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 291018 |
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| End bp | 291767 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726586 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_002017245 |
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| Protein GI | 194335451 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGGTCAGA AAGTTAATCC TACTGGATTT AGGCTGGGAA TTATCAGAGA CTGGGCTTCA
CGCTGGTATG ATGACAGTCC TGTTATTTCG GAGAAAATTA AGCAGGACCA TGTTATCCGT
ACTTATGTTC TTGCAAGGCT GAAGAAGGAG AGGGCAGGCA TTGCACGTAT TATTATCGAG
AGAACGACGA AGCATGTCAA GATCAATATC TATGCAGCCC GTCCGGGTGC TGTTGTTGGA
AGAAAGGGTG AAGAGATCAA CAACCTTTCC CAGGAGCTGA GTCGTATCAC CGGAAAAGAG
GTGAAGATCG ATGTTGTTGA GGTTGTCAAA CCGGAAATAG AGGCACAGTT GATTGGCGAT
AACATTGCCT ACCAGCTTGA AAATCGTGTT TCATTCAGAA GAGCCATGAA ACAGGCTATC
CAGCAGGCCA TGCGCTCTGG AGCAGAAGGT GTCAGGATCA GATGCGGAGG CCGTCTCGGT
GGTGCTGAAA TTGCCCGTTC GGAACAGTAT AAAGAGGGAA AGATTCCGCT TCATACCATC
CGTGCCAATG TTGATTATGC GAGCGTCACC GCTCATACCA TAGCCGGTAC CATCGGTATC
AAGGTATGGG TTTATAAAGG TGAAGTCCTC GTTCAGCGCA TTGATGCAAT CGAAGAGGAT
GAACTGAAGA GAATCAAGGA AAGACGCAAT GATGCAGGTG CAAGAAATCG CGATAGTCGC
ACAAAGCGCC GTCATCGTAC CAAGCGATAA
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| Protein sequence | MGQKVNPTGF RLGIIRDWAS RWYDDSPVIS EKIKQDHVIR TYVLARLKKE RAGIARIIIE
RTTKHVKINI YAARPGAVVG RKGEEINNLS QELSRITGKE VKIDVVEVVK PEIEAQLIGD
NIAYQLENRV SFRRAMKQAI QQAMRSGAEG VRIRCGGRLG GAEIARSEQY KEGKIPLHTI
RANVDYASVT AHTIAGTIGI KVWVYKGEVL VQRIDAIEED ELKRIKERRN DAGARNRDSR
TKRRHRTKR
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