Gene Ppha_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0271 
Symbol 
ID6462565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp266083 
End bp266625 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content46% 
IMG OID642726564 
ProductNUDIX hydrolase 
Protein accessionYP_002017223 
Protein GI194335429 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.443042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAAT GGAAATGGAA TAGTAGTTGC GAGATATATC GTAGCCCGTG GATTCGATTA 
CGAGAGGATA GCGTACTTCG GCCAGATGGA AAACCGGGGA CTTATGACGT CGTTGAAATG
AAAGGTGGAG TAGGGATTGT TGCGTATCGT GGCAATACCC ATATTTGTCT TGTCGGGCAG
TATCGCTATG CTCCTGCTTG CTATTCATGG GAAATTCCGA AAGGCGCTTT TGAGGGTTTC
GGAATGACAG AGGACCCTTT GGAGACAGCA AAACGGGAGT TAAAAGAAGA GACCGGTCTA
TATGGAGGGC GGTGGACTTC TCTTGTTTCT CTACACACAC TAATGGGTTC AACAAACGAT
CTGGTACATC TTTTTACAGT AGAGGATCTA ACCGAAGGTC CTACGGAAAT GGAGGCGACT
GAAGATATTA CGGTTCGTTA TGTAACGCTT TCGGAATTTG ACCAAATGGT TTTTGATGGC
TTAATTACGG ATGCTACCAG TATCGCCGCT GTGGCAATTG CTCAGAAAAA CTCGATCAGG
TAA
 
Protein sequence
MGEWKWNSSC EIYRSPWIRL REDSVLRPDG KPGTYDVVEM KGGVGIVAYR GNTHICLVGQ 
YRYAPACYSW EIPKGAFEGF GMTEDPLETA KRELKEETGL YGGRWTSLVS LHTLMGSTND
LVHLFTVEDL TEGPTEMEAT EDITVRYVTL SEFDQMVFDG LITDATSIAA VAIAQKNSIR