Gene Ppha_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0263 
Symbol 
ID6461500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp257608 
End bp258849 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content50% 
IMG OID642726557 
Producthypothetical protein 
Protein accessionYP_002017216 
Protein GI194335422 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAACA TATTGAGTAA TTTTACTCAA TATGTTGAGC AAAAAACCAT GATCATCAAG 
CGCTTTCAAA AGAAAGTTCT GACACAACGG ATCGAATCAG AACCCCGTCA ATTCATTCAG
GTGCTTTACG GCCCGCGTCA AGTTGGTAAA ACCACGCTGG CATTGCAGTT TATGGAGTCA
ACAAAGCTTT CGGTTCATTT CGCTTCTGCA GATCTTGTTG CATCCGGGCA ATCGAGCTGG
ATCAGCCAGC AATGGGAGGC GGCACGCATC AAGCTTCGGC AATCAGAAGA GAAGGAGGCG
GTGCTCATCA TCGACGAAAT CCAGAAAATC GGCAACTGGA GCGAAGCGGT AAAGAGGGAG
TGGGACAGCG ACACCGCACA ACGGCAATCA CTCAAGGTGG TTCTGCTCGG CTCATCCCGG
CTGTTACTGC AGCAAGGGTT GACGGAATCA CTCGCTGGCC GATTTGAAAC CCTCTTCATC
GGGCACTGGT CGTACCGTGA AATGAACGAG GCATTTGACT TCACTCCTGA ACAGTATGTC
TGGTTTGGAG GCTATCCAGG TGCGGCAGCA TTGATCAACG ATGAAGAGCG CTGGAGGCGC
TACATTACCG ATTCACTCAT CGAGACAAGC ATTTCGAAAG ATATTCTGAT GCTGACCCGT
GTTGACAAGC CAGCCTTGAT GAAACGGCTC TTTGAACTGG GATGCGGTTA TTCAGGCCAG
ATTCTCTCCT ATACAAAAAT CCTTGGTCAA CTGCAGGATG CAGGTAATAC AACAACACTG
GCACACTATC TGCGCCTGCT CGATACCGCT GGCTTACTTG GCGGACTGGA AAAGTACAGC
CCTGAAATGG TGCGGCGCCG GGCATCCATT CCGAAATTTC AGGTGCATAA CACAGCTTTG
ATCAGCGCAC AGCAGCAGTA CTCTTTTCAG GAGATTGTCA CAAACCCGTC GCAATGGGGC
AGATGGGTTG AGTCGGCAAT TGGCGCCCAT CTCATTAATC ATGCCCGCAC CGATGCAATT
AACCTCTTTT ACTGGCGTCA GGGGAATCAT GAGGTAGATT TTGTTTTGGA GCACAAAGGA
AAAGTGATCG GCCTTGAAGT TAAAAGTGGC CGTACCGGGC ACGCTTCCGG CATGGCAGCA
TTTGAGCAAC AGTGCAAGCC GTACAAGGTT CTTCTGGTTG GAAACTCGGG GATTCCATGG
CAGGAGTTTC TTGAACTGGA ATCTTTGGAG CTGTTTGCGT GA
 
Protein sequence
MLNILSNFTQ YVEQKTMIIK RFQKKVLTQR IESEPRQFIQ VLYGPRQVGK TTLALQFMES 
TKLSVHFASA DLVASGQSSW ISQQWEAARI KLRQSEEKEA VLIIDEIQKI GNWSEAVKRE
WDSDTAQRQS LKVVLLGSSR LLLQQGLTES LAGRFETLFI GHWSYREMNE AFDFTPEQYV
WFGGYPGAAA LINDEERWRR YITDSLIETS ISKDILMLTR VDKPALMKRL FELGCGYSGQ
ILSYTKILGQ LQDAGNTTTL AHYLRLLDTA GLLGGLEKYS PEMVRRRASI PKFQVHNTAL
ISAQQQYSFQ EIVTNPSQWG RWVESAIGAH LINHARTDAI NLFYWRQGNH EVDFVLEHKG
KVIGLEVKSG RTGHASGMAA FEQQCKPYKV LLVGNSGIPW QEFLELESLE LFA