Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0263 |
Symbol | |
ID | 6461500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 257608 |
End bp | 258849 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642726557 |
Product | hypothetical protein |
Protein accession | YP_002017216 |
Protein GI | 194335422 |
COG category | [R] General function prediction only |
COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCAACA TATTGAGTAA TTTTACTCAA TATGTTGAGC AAAAAACCAT GATCATCAAG CGCTTTCAAA AGAAAGTTCT GACACAACGG ATCGAATCAG AACCCCGTCA ATTCATTCAG GTGCTTTACG GCCCGCGTCA AGTTGGTAAA ACCACGCTGG CATTGCAGTT TATGGAGTCA ACAAAGCTTT CGGTTCATTT CGCTTCTGCA GATCTTGTTG CATCCGGGCA ATCGAGCTGG ATCAGCCAGC AATGGGAGGC GGCACGCATC AAGCTTCGGC AATCAGAAGA GAAGGAGGCG GTGCTCATCA TCGACGAAAT CCAGAAAATC GGCAACTGGA GCGAAGCGGT AAAGAGGGAG TGGGACAGCG ACACCGCACA ACGGCAATCA CTCAAGGTGG TTCTGCTCGG CTCATCCCGG CTGTTACTGC AGCAAGGGTT GACGGAATCA CTCGCTGGCC GATTTGAAAC CCTCTTCATC GGGCACTGGT CGTACCGTGA AATGAACGAG GCATTTGACT TCACTCCTGA ACAGTATGTC TGGTTTGGAG GCTATCCAGG TGCGGCAGCA TTGATCAACG ATGAAGAGCG CTGGAGGCGC TACATTACCG ATTCACTCAT CGAGACAAGC ATTTCGAAAG ATATTCTGAT GCTGACCCGT GTTGACAAGC CAGCCTTGAT GAAACGGCTC TTTGAACTGG GATGCGGTTA TTCAGGCCAG ATTCTCTCCT ATACAAAAAT CCTTGGTCAA CTGCAGGATG CAGGTAATAC AACAACACTG GCACACTATC TGCGCCTGCT CGATACCGCT GGCTTACTTG GCGGACTGGA AAAGTACAGC CCTGAAATGG TGCGGCGCCG GGCATCCATT CCGAAATTTC AGGTGCATAA CACAGCTTTG ATCAGCGCAC AGCAGCAGTA CTCTTTTCAG GAGATTGTCA CAAACCCGTC GCAATGGGGC AGATGGGTTG AGTCGGCAAT TGGCGCCCAT CTCATTAATC ATGCCCGCAC CGATGCAATT AACCTCTTTT ACTGGCGTCA GGGGAATCAT GAGGTAGATT TTGTTTTGGA GCACAAAGGA AAAGTGATCG GCCTTGAAGT TAAAAGTGGC CGTACCGGGC ACGCTTCCGG CATGGCAGCA TTTGAGCAAC AGTGCAAGCC GTACAAGGTT CTTCTGGTTG GAAACTCGGG GATTCCATGG CAGGAGTTTC TTGAACTGGA ATCTTTGGAG CTGTTTGCGT GA
|
Protein sequence | MLNILSNFTQ YVEQKTMIIK RFQKKVLTQR IESEPRQFIQ VLYGPRQVGK TTLALQFMES TKLSVHFASA DLVASGQSSW ISQQWEAARI KLRQSEEKEA VLIIDEIQKI GNWSEAVKRE WDSDTAQRQS LKVVLLGSSR LLLQQGLTES LAGRFETLFI GHWSYREMNE AFDFTPEQYV WFGGYPGAAA LINDEERWRR YITDSLIETS ISKDILMLTR VDKPALMKRL FELGCGYSGQ ILSYTKILGQ LQDAGNTTTL AHYLRLLDTA GLLGGLEKYS PEMVRRRASI PKFQVHNTAL ISAQQQYSFQ EIVTNPSQWG RWVESAIGAH LINHARTDAI NLFYWRQGNH EVDFVLEHKG KVIGLEVKSG RTGHASGMAA FEQQCKPYKV LLVGNSGIPW QEFLELESLE LFA
|
| |