Gene Ppha_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0258 
Symbol 
ID6462239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp251042 
End bp252208 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content57% 
IMG OID642726552 
Productglycosyl transferase group 1 
Protein accessionYP_002017211 
Protein GI194335417 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTGT CATCCAATAG GGGAGCGCCT TGCAGTCCGT TCAGGCTTGT CTGGTTTTCC 
GAGATACAGT GGGACTTTCT CTCAACCCGG AAGCAGCGCC TCTTGTGCCG CTTTCCGGAG
AGTTGGAGCA TTCTTTTCAT AGAGCCTTTT GCGCTTCGCC GCCGCCACCA CTGGATTCCA
GTCAAAAGGG GGCGGGTCTG GGTTGTCACT GTTCCTTTTC TGAAGAGCGT TCCCTTCAGG
ATAGGGCGCC TGCTCGATCT TCCTTTGCTG CGCTGGCTTC TCTCCCTGCC CGGAATCCTG
CTGATGCTCT TCTGGGTGAC GATCCTCGGA TTTGGCTCCT CAAACAGAAT TATTGGCCTG
AGCAATATCT ACTGGGGCAG GGTTGCAGCC CTCCTGCCAT GCCGCCTTCG CTTCTATGAT
GCCAATGATG ATCATCTTGC CTTTCCCGAC AATCCGCACT GGCTGAAGGG CTCTCTTGAT
CACTATCTTT CGAAGGTTGA TCTGCTCTTC AGTGTCAGTC GTGAGCTGAC CAGCCGTCTC
AGGGTGCCAC CCGGCGTTCG CCTGGTTGAT CTTGGCAACG GTGTTGAGTT CAGCCATTTT
GCCATCTCCC GTCCTCGCAA GCCGGCCGCT CTTTCCCGCC TCAAGGGGCC AATTCTTGGC
TATGCGGGGG CCATGGACTG GCTTGATAGC TCCCTGATTG CTGCTACTGC CCGTGCATGG
CCGGAGTATT CGATTGTGCT ACTCGGTCCG GCCTATGAGA GAGAGTGGTG GCAAAAACAG
GCCGCCATCA ACGAGCTGCC AAACGTCCAC TATTTCGGCA AGATTGAGTA CAGCGAACTT
CCCGCCTGGG TGCAGCACTT CGATCTTGCC CTGATGCCGC TCCTTTCAAG TGATCTGAAA
AGGGTATCCC ATCCCAACAA GCTCTATGAA TATGCCGCCG CAGGGGTGCC GGTACTCTCC
ATGAACTATT GCAGTGCGGT GGAGCGGGCG CGGGAGGTGC TGCATGTGGC CGTTTCTCAG
GAGGAGTTTG TCCGCATGGT GCCGGAAGCT CTTGCTGACC GGCGTGTTGA GGCGCGGCAG
GCATTTGCCC GGCAGCACAG TTGGGATACG CTTGCTGCCG TCATGGTGCA GGAGCTGGAG
AAGGCCTCTC GGGAGAGGAG TCTGTGA
 
Protein sequence
MNLSSNRGAP CSPFRLVWFS EIQWDFLSTR KQRLLCRFPE SWSILFIEPF ALRRRHHWIP 
VKRGRVWVVT VPFLKSVPFR IGRLLDLPLL RWLLSLPGIL LMLFWVTILG FGSSNRIIGL
SNIYWGRVAA LLPCRLRFYD ANDDHLAFPD NPHWLKGSLD HYLSKVDLLF SVSRELTSRL
RVPPGVRLVD LGNGVEFSHF AISRPRKPAA LSRLKGPILG YAGAMDWLDS SLIAATARAW
PEYSIVLLGP AYEREWWQKQ AAINELPNVH YFGKIEYSEL PAWVQHFDLA LMPLLSSDLK
RVSHPNKLYE YAAAGVPVLS MNYCSAVERA REVLHVAVSQ EEFVRMVPEA LADRRVEARQ
AFARQHSWDT LAAVMVQELE KASRERSL