Gene Ppha_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0255 
Symbol 
ID6461030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp248557 
End bp249633 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content54% 
IMG OID642726549 
Productglycosyl transferase group 1 
Protein accessionYP_002017208 
Protein GI194335414 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGGG ATGCCCTTCA AGACCGGGGA TATGATGTTA CTCCTGTTGC GTTCAGGGCT 
CTCTACCCCG ATTTTTTGGT CAAGGGTGGA GTTGAAGAGG CTCAGGGAGC AGATCTCACC
TTTTTTAATG AGTCGCGTCT GGTACTGTTC AACCCCATTT CCTGGTTTGG AGCGATACGA
CATCTCCGGT CACTGAAACC AGATCTGCTT CTTGTGGCTT ACTGGAGCGG ATTTCTGGCA
CCGCTTTTTT TTACGATACG TCGTCTGACC GGTATCAGGA TGGTGGTGCT GCTCCATAAC
CTCTCTTCAC ATGAATCATT TTTATTCGAC CCACTTATGC AGAGGCTGCT GGCTGCTTCC
GCCGATGGAT TTTTGACCCT TTCGGAGGCT GTTACCAAAA CGGTGCAGAG AGCTCTGCCT
GAAATCCCTT TGCTGCAGCT TTTTCATCCC CTCTATGAGC CGGATGGGGA GCACTCTTCG
GTGCAGGATG CACGTCAGGC GCTCAAGCTC GACGCTCACT CTCCGGTGCT GCTTTTTTTT
GGTTATGTGC GCCATTACAA GGGGCTCGAC ACCATGCTTC GTGCCATGCC AGCGATTCTG
CAGCGGGATC CCGCGCTTCG TCTTGTCGTT GCCGGACAGT TTCATGAGGA TCATGGTATC
TATCGCAAGC TTGTTGCGCA GCTTGGCATC GAAGGAAACG TCGATTTTTA CCCCGGTTAC
GTTTCCACTG AACGCAGTGC CCTCTTTTTT GCTGCGGCAG ACGCTGTTGT ACTTCCCTAT
CGCAGTGCAA CGCAGTCGGG AGTGGTGCAA CTTGCTTATG GCCACGGTTT GCCCGTGATC
GTCACACCGG CAGGCGCCCT TCCCGAGATG GTTCGCCCTG GTAAAACAGG CTGGGTTGCC
CCTGACTGTT CGGCTGAGGG GTTTGCCGGG GCAGTCGGTG AGTTTCTCAA TCGTCGTGAC
AAGCATGAGC TTGAGGCGAT GCGCCCGGCT ATAGAAGCTT TCCGGCGTCA CTTTTCCTGG
GAGGTTTTTG CAGAACAGGC CGGGCATTTT CTTGAAGCAA GAGCTGTACG GAGGTGA
 
Protein sequence
MLRDALQDRG YDVTPVAFRA LYPDFLVKGG VEEAQGADLT FFNESRLVLF NPISWFGAIR 
HLRSLKPDLL LVAYWSGFLA PLFFTIRRLT GIRMVVLLHN LSSHESFLFD PLMQRLLAAS
ADGFLTLSEA VTKTVQRALP EIPLLQLFHP LYEPDGEHSS VQDARQALKL DAHSPVLLFF
GYVRHYKGLD TMLRAMPAIL QRDPALRLVV AGQFHEDHGI YRKLVAQLGI EGNVDFYPGY
VSTERSALFF AAADAVVLPY RSATQSGVVQ LAYGHGLPVI VTPAGALPEM VRPGKTGWVA
PDCSAEGFAG AVGEFLNRRD KHELEAMRPA IEAFRRHFSW EVFAEQAGHF LEARAVRR