| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0246 |
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| Symbol | |
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| ID | 6462147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 237621 |
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| End bp | 240362 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726540 |
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| Product | hypothetical protein |
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| Protein accession | YP_002017199 |
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| Protein GI | 194335405 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0230435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTTAT CGCGTAAAAG GGTCGCATCG CTGCTTGTTC TTTCACTTTT TTCGCAGGAA
AGTCCGATTA CAGCAAGTGC CGCAATATCA AGAATCCCTG TTGAACAGCT TGATGGGAAA
CAGCGGGTGA GCGTTGTGCC CTGTGCTGAT TATGAGGCAG GGGCGCTGCA TACCCTGATG
TTTGGTGCAC ACTGGCGATC ACTCTGGACA ACCCCTGTCG AGATGCCAGT TCTTGATCTG
GGCTCTTTTG CTGGTGGATT GGTGCCGTTT GAGAAAGGGG GCGGTTTTCA GACGATGACG
TTGAGTTTCA GGGGAGCAAA TGGAAGGGAA TATCGTTTTC GTTCTCTCGA TAAAGACCCT
TCACGCGGCA TGCCCTCCAA GCTGAAGAAT ACCGTTATTT CTGCAGTTTT ACAGGATCAG
GTTACCACTT CAAATCCTGT GTCGGGCGTT ATTGTTTCCC CGTTGCTTGA TGCTGCTTCT
ATTTATAATG TTGCTCCGGA ATTGACGGTT TTACCTTACG ATAAAGATCG TCTTGGTGAA
TATTATGATG AATTTTCCGG TCTTGCGGGG ACAATAGAGG AACGTCCGAA TGAAAGTGAA
GGTGCAGGTA CAGGTTTCAA AGGATCGGAT AAAATATCTG GTACGTATAC CGTTTTTAAC
AGCCTTGAAA AAGATAACGA CAACCAGGTT GATAGCGCAT CCTATTTAAG GGCAAGATTG
CTTGATCTCT TTATCGGTGA CTGGGATCGT CACTCCGATC AGTGGAAATG GGCCGGTTAT
AAAAAAGAGG GCAATACCAG ATGGTATCCT ATTCCCCGAG ACAGGGATCA TGCCTTCTCC
CGTCAGGACG GAGTATTTTC ATGGATTATT ACCAGGGTTG TTCCCCGGAT GACGAATTTT
GGGGAAAATT ATCCGAGTAT CAAAAATTTA AGCTTCTCCG GTCGTCCTCT TGACCGGCGT
CTCTTGTCCG GGATTGACAG GACAGAGTGG GATTCGGTTA CCATCGAAGT CAAGCAGAAA
CTGACTGACC AGCTTATCCA TGATGCCGTC ATGAAGATGC CGCCTGCAAT GTACGACAAG
GAGGGTGCTC GTCTTGAACG TGAGCTTCGA TCAAGAAGAG ACCTACTTGA CAAAGCATCT
GCAGAACTCT ATCTGCTTTA TGCTGGAGAT GTGGATGTCT ATACAAGCAA TAAATCTGAG
TATGCAAAGG TACATCGTAC GGCGGATGGC AGTATAGAGG TTGCAGTTTC CAAAAGAGAT
GGCAATACCG GAGCCGCAAA GGGAGTGCCT TTCTATTCAC GCATCTTCCA TCCTGTCGAA
ACAAATGAGG TCAGACTCTA TCTTCAGGGA GGCGATGACC GGGTTATTGT TGATGGGCCG
GTCTGCAAAG GTGGAGTGAA AGTAAGGGTT ATTGGCGGTG AGGGGCAGGA TATCTTTGAA
GATTATTCCA TAAGAGCTCT CTCTGGTGAC CCCGATACCT CCGCGATGAT GACCTTTTTC
TATGATGATG GTGAGAAATC GGAATTTGTC ACCGGGAACC ATACCGTGGT TGACCGTCAT
ACGGTTTCTG TTCCGGTTGA TGATCAGGAG AAATATGATC TGATGGCGCG TGATGAAGGT
CGAGAGATTG GTTTTCGTCC AAGCGTTGAT TATTCCTCGG ATACCGGAGT ATTTCTTGGG
ATGGGAGCCA CTCTTGTAGA TTACAGCTTC AGAGCGACCC CTTATCGTTA CAGAATGCAA
CTGAACGGAG GTTTTTCTAC CGGAGAGGAT ATTCGTTATA AACTGAAGTA CACAGGCGAT
TTCCGGTCGC TTTTCAGGAA TACATCACTT TTTGTAGAAG CGGGTACGAC GGGTATTGAT
ATCATTAACT TCTACGGGCT TGGAAACGAA AAATACTATA ATGGCACAGG CCTCACGGAA
GATGATTTTG AAATTCTCAA CCAGGTTACC TCTTTAAGTG CCTCATTGCG TTATCCGATG
GATAGGAATT ATAACTGGAG CGCAGGAGTC GGTGCAAAAT GGATAGACCT TGCTCTTACC
CCAGGTTCAT TCAATGACCT GAACAGAGCC CAGGTTCCCG GTATCAATCA TGATTTTGCT
GGCAGTTTCA GGGTTGGATT TCATTATGAT TCACGCGATA GCGGAGATGA CATTGCACTT
TCACCAAGAA AGCAGGCAAG TTCTCTTGCA GTCGCAGGTC AGGCGGGCAA TACAACGGCT
CTCAGCGGAA TCATGGTGGA TGTCAGTGGG AGCTATTATC CCGAGTTTTT TGGAAATGAA
CAGGCATATG GAAAACTCAG TGGTGAATTC CGTACCTATA TCCCGCTGGT TTCATCCCGT
TATTCACGGC TGGCCCTTCG TTTTGGCGGA GAGAAGTTAT GGGGTGAATA TCCCTTTTAT
GAAGCGGCTT TTCTTGGTGG TTCCACCTCA TTGAGGGGTT ATGACCGGCA GCGTTTTGCC
GGAGATGCTT CACTCTATGC CGGTTCGGAA CTTCGTCTCT ACCTGGGTAC CTTCAAGTTT
CTTGTTCCGA TTATGTATGG CCCCCTGGCT TTTGCTGAAA CCGGCAGGGT TTTTCTTGAC
GGAGAGGATT CCAGCGCATG GCATTCCAGT GCTGGCGGAG GGTTGTGGTT TGGCGGTATT
GAGTCGCGCT ATTCCGCAAG CATCGTTTTT GCACAGGGAT TTGATGATGG CCGACTGATG
GAGGATTACG GAATCTATCT CAGGACGGGT TTCAGTTTTT AG
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| Protein sequence | MRLSRKRVAS LLVLSLFSQE SPITASAAIS RIPVEQLDGK QRVSVVPCAD YEAGALHTLM
FGAHWRSLWT TPVEMPVLDL GSFAGGLVPF EKGGGFQTMT LSFRGANGRE YRFRSLDKDP
SRGMPSKLKN TVISAVLQDQ VTTSNPVSGV IVSPLLDAAS IYNVAPELTV LPYDKDRLGE
YYDEFSGLAG TIEERPNESE GAGTGFKGSD KISGTYTVFN SLEKDNDNQV DSASYLRARL
LDLFIGDWDR HSDQWKWAGY KKEGNTRWYP IPRDRDHAFS RQDGVFSWII TRVVPRMTNF
GENYPSIKNL SFSGRPLDRR LLSGIDRTEW DSVTIEVKQK LTDQLIHDAV MKMPPAMYDK
EGARLERELR SRRDLLDKAS AELYLLYAGD VDVYTSNKSE YAKVHRTADG SIEVAVSKRD
GNTGAAKGVP FYSRIFHPVE TNEVRLYLQG GDDRVIVDGP VCKGGVKVRV IGGEGQDIFE
DYSIRALSGD PDTSAMMTFF YDDGEKSEFV TGNHTVVDRH TVSVPVDDQE KYDLMARDEG
REIGFRPSVD YSSDTGVFLG MGATLVDYSF RATPYRYRMQ LNGGFSTGED IRYKLKYTGD
FRSLFRNTSL FVEAGTTGID IINFYGLGNE KYYNGTGLTE DDFEILNQVT SLSASLRYPM
DRNYNWSAGV GAKWIDLALT PGSFNDLNRA QVPGINHDFA GSFRVGFHYD SRDSGDDIAL
SPRKQASSLA VAGQAGNTTA LSGIMVDVSG SYYPEFFGNE QAYGKLSGEF RTYIPLVSSR
YSRLALRFGG EKLWGEYPFY EAAFLGGSTS LRGYDRQRFA GDASLYAGSE LRLYLGTFKF
LVPIMYGPLA FAETGRVFLD GEDSSAWHSS AGGGLWFGGI ESRYSASIVF AQGFDDGRLM
EDYGIYLRTG FSF
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