Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0191 |
Symbol | |
ID | 6462574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 186123 |
End bp | 190157 |
Gene Length | 4035 bp |
Protein Length | 1344 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642726485 |
Product | Sel1 domain protein repeat-containing protein |
Protein accession | YP_002017145 |
Protein GI | 194335351 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAATA AATTAACAAC CGGACGAATT CTTATAGTAT TTATTATTGC TTTTGCTCTA ATTAAAACGT ATTGGCATGT GTTTGTTTTT ATGAGCATTT CCGCTATCGT AATCTGGAGC ATTATTAAAG CAATTAAAAA GATCCAATAT TCTCAATCTT TACATTTGCA TGCGCAAAAT CATATAAACG ATTCCAAGTC CTATCCAAAT CAAGGCGAAA TCATCATTTC TAATACCACG AAATCACATA AAGAAATAAA AGATTTAACA TCTATCCGAT GCAAAGCTGA AGATGGTGAT GCGCAAGCTG AATATGAGCT TGGCATGATA TATGACTGCG GCTATTTTGC TAATGGCCAA GGTATTCCAC AAGATAACAC CGAGGCTGTA AAATGGTACC GTTTAGCTGC CAATCATGGG CACCCTACAG CGCAATATAA TCTTGGCTGG ATGTATTATG CCGGTGCTGG CGTGGAACAG GATTATGATG AAGCATTACG ATTAACCCAA CTGGCTTCGG AAAATGGTAT GCCCAATACT CAGGCACGTT TCGACCTAAT AAAGAAGGCA AAAGATGACT ATATAGAGGA GGAGCAATGG AATCTGCTTA CTAAAAAACA AGTCCATTCA GCAACCCTAT TACCGAGTAT TAAGTATGAG ACTGATATAA ATATTATAGC AGATAAAAAT AAAATCACAC AATCCAGCAA AGCGATTACA GCAAAATATG GTACAAAAGA ACTTACAACG CCGCTTACTG AGAACAAATT TGAGACTCTA ATCAAAACAG AAAAATCAAC TCCAGCCAAA TTAAAATCAA CAATAGATGC AGAAATTTTA GTACAGACAC AAAACACAAA GGAAATTGCA GCAATAAAGT TACAGATAGC AACACTGCTT AAAGAAACAA TAAGATCTTA TATGCAGTCA ATTTTCAGCA CAATGCGTTT TAAAGAAATG CAAACGGTGT CTCAGGATTC ACCCAATCAA GGTTATGCAC CTACACCGTC AGAAAATACA ACAAAATCCC CAGAAACAAC AGGGATAGTA AATACCAGTG CAGATAAACT CGATGCGTAT AGACGCTTTA TTAATAATAA TTCTATTGAT GCTTCATCAA ATCTACCTTC ATCATTTTTA AAAAATAATA TTGAACAAGA ATTAATAAAA TTGGAGCATT GGTTTGAAAG AATAATTACT TTTGATGCTC CGATTTTAGT CTCTTTTGCT TCATTGTTAT GGCATATGTC AATAAAAAAA TTGACTATTA GTGAAAAAGA GGCAATAGAT ATTGCAAATC TTCTTGAATC AATAAATATA GGGATCGAAC CCGATTCTCG CTTCAGCGAC TTTATCCCGA ATCCAGAGCA CAACGTAGTT CTTTTCAGAA TCAGCGAAAA TACTCCAAAG CTCCCTTCAT CGGAATACTC CGTTGCTACA CTCAGCCTCC ATTTAGCCTC GGCCTTTGCC CTTACTGAAA CAACTGTACA CATCAGCGAA AAACAAAATT GGAAGCAACT GCTTGAAATT TTGCCGCACC TCTCTTCAGA TGAAATAATC AGACTACAGG CTCATACATT GTTTATAAAG ACTTCCGCTC AGACCTTCAG CATTAATGAT ATCAAAAAAA ACATAGCGAT AATCGATCAA AGTCAAAAAG AATCACTATG GAAATTCCTT GTTGGCATCG CAAAGTTAAA CGGATGCACT GACATAACTA AAATAAAAAA TTTTACTCGA CTATATACAA TGCTGGGTCT TGATGCACTG ACTATTCCCA GTCATACGCA TGAAATTGCT GTAGAACCTA TAGCAATTCA AACCACTGAT TTTTTGCCAT CTTCAGGGTA TTCAATCCCC GCTCAGCAAA TAATAGCGGA AGGCATTTCT CTTGAGATGA ATGAAAACGA AGCAACCCAT ACAGTGGCCA ATGCCATCTC CTCAAAATCT TTAACAAAAA AGATAATATC TACAGATGAA TTATGGGTTC CCTTTGGAAA AGCTATTGAA CATTCTGGGT ATACAATTCC TGACGGTCTT CTTTATTTTG GGACTGCTTT AAAATCTATT ACAAAGTCAC AAGAAGAACC ATCTCTTATT GACATCTCTC TGCCAGTTGA AAAGGCAAAT TCTGATATTA ATAGTAATAA TATGAGGTAT TGGCCAAATT ACTCACAAAT ACACGCCACA CATCGAGCAG CATATCTCGA CTGGCTCTCC ACAGGAAGGA AAGAACCAAT GGCAAATATT GGTTACGTTT TTCTTTTCTT TTATGGCTTG GAGAGACGGG TTTTGCTTGA TAATGCTTTT TCAGCAGTTG ACGATTTACC AGTCATTATC GAAGAAGTTC AACGACTTCT GACTGTATAT AAAAACAATG CTTCATTTCG TCAGTACGCC AATAATTTTC TGGATATTTT GCAGATTATT CGAGGGGGAG TTTCTTTTTA TCAGACTGAA CCATCGCTTG AGTCATACTC TTGGAAACAG CCCTTAATCT TTAAGGTTGC ACTTGGACAA ATGGCTGCCG ATAAGGTTCC ACTCCCTGCA GAGTGGGCTT TAGCATGGGT AATAAATGAT CCATCAATTC AAAAAAAAAC GCCTGTTAAA CGTTGCAAGC TTGAATTTCT TGACCTGTTC AAACTTCAGT ATACCGAAAA GTTTAACGCG GGTATGCTGT TAATACCAAA TAAAAAAAAG CTCCATGCGA CATATCACCC TGCCAGTCCT CTGTTTGATA AAGATGTCAC AATCCCGATT GCGGATCTTC CTGATGTGAC TAATGTTTCT GAGGAATCAG AAAAAATAAG AGATCTCGTA AATGAATGTA CTGATAAACT TGAAGATTAT AGCCGCTTTC TTGGGCGTAA TCCGGATAGC AATAATTCTC TTGAAGCGAT GTCGCTTCTA CCTAAACTCC TTGTAAAAAA ATATGTAGCA ACAAAATTTC AAAAACTGAC AACCTGGCTG GAACAGCAAA GTCTTTCTGA TACTCCAGTG CAGGTCTCTT TTCAATCAAT TTTAGAACTA ATACCACCAA TAAATCAGAA CTGTTTTGGC AAGACAGAAG TGATAACCGT TGCCAATTTT CTTGGCAAGA TAAACTTTGG TATTGAGCCT GACCCTCGCT TCGGCAACTT TTTCTCCAAA CAAGAAAACA ATATCGTTCT TTTCAAAATC AGTGATAATG CGCCTAATAT ACCCTCTGCT GAGTATTCTG CTTCAACTCT TGTTCTCCAT TTGGCCTCTG CCGTTGCCAC TTCTGATGGT ACTGTGAATA TAAGCGAAAA GCAACAGTTG GAGAAACATC TTGAAGTTTG CTTACACCTC TCTTCAGATG AGAAAACAAG ACTGAAGGCT CATTTATTAT TCCTTCTTTC TTCCTTCCCT GGCATTAATA ATGTCAAGAA AAGAATAGAG TTACTTAAAC AGGAACAGAG AGAATCACTT GGGAAATTTC TTGTTTGTAT TGCTCAGGCG GACGGCTATA TTGACGTAAT GGAAATAAAA ATTCTTACGC AGATATATGC CATGCTTGGT CTTGATGCAC AGAGTCTTTA CAGTCAGGCC CATACTGCGG CTATCGAACC TGTCGTCGTT AAGACTTCGG ATTTCGAGAC TTTACCAGAG TATTCAATCT CTGCTTCACC AAAAATATCT AATGGTATTT CTCTTGATAT GGACAAAATA AAAACAATCC ATGCAGAGAC CAATACTATA TCCTCAATTC TGAATGATAT TTTCTCTGAA AATGAACATG AGCAGATAAC AACATTAATG TCGGAAGCAA GGAGAACAGA CGTTCCCATT ACTGGACTTG ATCCTAAATC ATTTGCATTT ATGAAAGAGC TCGCGTGCAA GCTCATGTGG ACGAGAGTCG AACTGGAAAA ACTTGCAGCC GACCACAGCT TGATGCTGGA TGGAACACTC GAAAGCATAA ACGACGCATC ATTTGATCAC TTTGGAGATA TGTTCTTTGA AGGTGATGAC CCAATAATTA TCAACGCACA ATTTGCCAAG GAGATCAATG TATGA
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Protein sequence | MGNKLTTGRI LIVFIIAFAL IKTYWHVFVF MSISAIVIWS IIKAIKKIQY SQSLHLHAQN HINDSKSYPN QGEIIISNTT KSHKEIKDLT SIRCKAEDGD AQAEYELGMI YDCGYFANGQ GIPQDNTEAV KWYRLAANHG HPTAQYNLGW MYYAGAGVEQ DYDEALRLTQ LASENGMPNT QARFDLIKKA KDDYIEEEQW NLLTKKQVHS ATLLPSIKYE TDINIIADKN KITQSSKAIT AKYGTKELTT PLTENKFETL IKTEKSTPAK LKSTIDAEIL VQTQNTKEIA AIKLQIATLL KETIRSYMQS IFSTMRFKEM QTVSQDSPNQ GYAPTPSENT TKSPETTGIV NTSADKLDAY RRFINNNSID ASSNLPSSFL KNNIEQELIK LEHWFERIIT FDAPILVSFA SLLWHMSIKK LTISEKEAID IANLLESINI GIEPDSRFSD FIPNPEHNVV LFRISENTPK LPSSEYSVAT LSLHLASAFA LTETTVHISE KQNWKQLLEI LPHLSSDEII RLQAHTLFIK TSAQTFSIND IKKNIAIIDQ SQKESLWKFL VGIAKLNGCT DITKIKNFTR LYTMLGLDAL TIPSHTHEIA VEPIAIQTTD FLPSSGYSIP AQQIIAEGIS LEMNENEATH TVANAISSKS LTKKIISTDE LWVPFGKAIE HSGYTIPDGL LYFGTALKSI TKSQEEPSLI DISLPVEKAN SDINSNNMRY WPNYSQIHAT HRAAYLDWLS TGRKEPMANI GYVFLFFYGL ERRVLLDNAF SAVDDLPVII EEVQRLLTVY KNNASFRQYA NNFLDILQII RGGVSFYQTE PSLESYSWKQ PLIFKVALGQ MAADKVPLPA EWALAWVIND PSIQKKTPVK RCKLEFLDLF KLQYTEKFNA GMLLIPNKKK LHATYHPASP LFDKDVTIPI ADLPDVTNVS EESEKIRDLV NECTDKLEDY SRFLGRNPDS NNSLEAMSLL PKLLVKKYVA TKFQKLTTWL EQQSLSDTPV QVSFQSILEL IPPINQNCFG KTEVITVANF LGKINFGIEP DPRFGNFFSK QENNIVLFKI SDNAPNIPSA EYSASTLVLH LASAVATSDG TVNISEKQQL EKHLEVCLHL SSDEKTRLKA HLLFLLSSFP GINNVKKRIE LLKQEQRESL GKFLVCIAQA DGYIDVMEIK ILTQIYAMLG LDAQSLYSQA HTAAIEPVVV KTSDFETLPE YSISASPKIS NGISLDMDKI KTIHAETNTI SSILNDIFSE NEHEQITTLM SEARRTDVPI TGLDPKSFAF MKELACKLMW TRVELEKLAA DHSLMLDGTL ESINDASFDH FGDMFFEGDD PIIINAQFAK EINV
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