| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0189 |
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| Symbol | |
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| ID | 6461975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 182595 |
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| End bp | 184799 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642726483 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002017143 |
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| Protein GI | 194335349 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.583958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATCCTT TAAACTCTGA CGAATCACAG GCATTTTTCC TGCTCGATGA AAAGATTCAG
CGCTGGATCT GGGAACAGAA ATGGATGACA CTGCGAGATG CACAGGAACG GGCAATAGCA
CCCATACTTG CCGGAAATAC CGATGTTATT ATTGCTGCGG CGACAGCCAC AGGCAAGACG
GAAGCGGCAT TTCTTCCAAT CTGCTCAAAG CTTCTTGCGA AGGAGTGTCA AAATGCCTCT
GTCCTCTATA TCAGCCCATT GAAGGCACTC ATCAATGATC AATTTTCCCG AATGGAACAG
TTGTGTGAAC GACTTGATAT TCCTGTTCAT CCTTGGCATG GAGATGTTTC TGTAAGCAAA
AAAGGAAAGT TCCTCAAAAA ACCAACAGGG ATCCTCTTGA TTACGCCTGA ATCTGTTGAA
GCCCTTTTTG TTAACCATGG CAGTGCTGTT CCACAGATTT TCAACAATCT TCTTTACATC
GTCATTGACG AGCTTCACTC CTTTATAGGT TCTGAACGAG GCCAACAATT GCAATCTTTG
CTTCATCGTA TCGAATTTGC CATCAAGCGA AAAATACCAA GAATAGGATT GAGCGCAACC
ATTGGGGACA TGCACCTAGC CTCACGATTC CTGCGCCCCG AAACAGAAGC AAAAACTGTG
ATAATTGTCT CAAACGCTAC GGGACAGGAA CTTCAGCTTC TTTTGAGAGG ATATGTCAAC
AAAGCTCCAC TGCTGCATCC GATCGAAGAG ACCGAGGAGG TGCCGCCTGA TGGCAGCAGC
CTCGAAATAG GAGAAGACCT TTTTAAGACC CTCCGGGGAA AAAGCAACCT TATCTTTCCT
AACAGCCGGG AGCAGGTAGA AAATTTTTCG GATTTACTTC GAAATAAATG CGAAGAACAA
CATCTTCCTA ATGAATTTTG GCCACACCAC GGGAACCTTG CAAAAGGACT TCGCGAAGAA
GCCGAAGCTG CAATAAAGGA TAAATCACAT CCCGTTAACA TCGTCTGCAC ATCGACTCTC
GAAATGGGTA TTGATATTGG TAGCGTGATC AGTATTGCTC AGATAGGTGT ACCTCCCTCT
GTTGCAAGCT TGCGTCAACG ACTTGGCCGT TCGGGAAGAA AAGATGGTGA CCCTGCAATT
CTAAGGATAT ACATTCAGGA AAATGAAGTT ACCATAAGCT CCAAACCCCT GGCTTGCCTT
CGTTCCAATC TGATACAGAC AATTGCTATG GTAAGGCTTT TGCTTGAAAA GTGGTACGAG
CCACCTCCAT CCGGCGGGCT GCACCTCTCG ACGATGGTAC AGCAACTACT CTCCCTGATA
GCTCAGTATG GCGGAATAAC TGCGGTACAA GCATATAATT TACTCTGCAA AAACGGAGCG
TTTCAGGAAA TCGGGCAACA GATGTTTGTG GATTTATTGA GAACCCTCGG CAACCAGCGC
CTCATCATGC AAGCAAGTGA TGGATTATTG CTGCACGGTC AATTGGGAGA ACGCATTGTT
AACCACTATT CTTTTTACGC AGCATTCACA ACTCCAGAGG AATATCGCCT CCTAACCGGC
GATCGAACAC TTGGAACACT TCCCCTTGAC CGTCCCGTCG AAGTCAACTC TTTGCTCATT
TTCGGTGGAA GACGATGGAC GGTTTTAGAC GTAGATGCAC AAAAAAAAGT AATTTCACTA
AAGCCGGCAA CAGGAAAAAA ACTTCCTCAA TTCGATGGGC AAGCAGGCAG AGTTCATGAT
CAGATTCGGA AGGAAATGTT TGCCGTCTAC ACGGAAAAAG GTATACCGAT ATTTCTTGAT
GCTCAGGCAA AAGAACTGTT GGGAGAAGCA AGAGAGGCTT TTGACCGACT TTCATTATCC
AATAAAAAGA TACTCATTCA AGGAAATGAA ACGTATCTCT TCTGTTGGAT GGGCGACAAA
ATTTTAGATA CTTTGGTAGC TATGCTCAGG TCAAAAGGAT TGACAGCAAA TAATTACGGG
ATTGCAATAG AGATTTCCAG TGTATCACCA AATAAACTTC AGAGCTGCTT GAGAGCATTG
TTAAAAGAGG GTGTGCCAGA TGCTTATGAG CTTGCCCGAT CAGTCGCCAA TAAAGCGACA
GAAAAATATG ACAACTTCTT GACGGATGAA TTATTGAGTG CTGACTATGC TGCCTCAAAA
TTCGATGCCG AAGGCGCGTT TAAAGTGTTA ACATCGATAA TGTAG
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| Protein sequence | MHPLNSDESQ AFFLLDEKIQ RWIWEQKWMT LRDAQERAIA PILAGNTDVI IAAATATGKT
EAAFLPICSK LLAKECQNAS VLYISPLKAL INDQFSRMEQ LCERLDIPVH PWHGDVSVSK
KGKFLKKPTG ILLITPESVE ALFVNHGSAV PQIFNNLLYI VIDELHSFIG SERGQQLQSL
LHRIEFAIKR KIPRIGLSAT IGDMHLASRF LRPETEAKTV IIVSNATGQE LQLLLRGYVN
KAPLLHPIEE TEEVPPDGSS LEIGEDLFKT LRGKSNLIFP NSREQVENFS DLLRNKCEEQ
HLPNEFWPHH GNLAKGLREE AEAAIKDKSH PVNIVCTSTL EMGIDIGSVI SIAQIGVPPS
VASLRQRLGR SGRKDGDPAI LRIYIQENEV TISSKPLACL RSNLIQTIAM VRLLLEKWYE
PPPSGGLHLS TMVQQLLSLI AQYGGITAVQ AYNLLCKNGA FQEIGQQMFV DLLRTLGNQR
LIMQASDGLL LHGQLGERIV NHYSFYAAFT TPEEYRLLTG DRTLGTLPLD RPVEVNSLLI
FGGRRWTVLD VDAQKKVISL KPATGKKLPQ FDGQAGRVHD QIRKEMFAVY TEKGIPIFLD
AQAKELLGEA REAFDRLSLS NKKILIQGNE TYLFCWMGDK ILDTLVAMLR SKGLTANNYG
IAIEISSVSP NKLQSCLRAL LKEGVPDAYE LARSVANKAT EKYDNFLTDE LLSADYAASK
FDAEGAFKVL TSIM
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