| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0188 |
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| Symbol | |
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| ID | 6460895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 181976 |
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| End bp | 182353 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642726482 |
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| Product | PilT protein domain protein |
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| Protein accession | YP_002017142 |
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| Protein GI | 194335348 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTATTG ACTCTGACGT CCTTATTTGG TATATGCGAG GGAATGAAAA AGCATATCAG
CTCATTGAAA ACTCATACAA TTTTTTCATA TCGGTCATTA CCTATATGGA ACTGGTTCAG
GGAATGAGAA ACAAACAAGA GTTAATCAAG CTTCGTAAAG CACTCAATGC ATGGAATGCA
CAAATTCTGT ATGTCTCTGA AGAGATATCT GCAAAAGCAA TGTTTTACGT GGAACAACAT
TTTCTCAGTC ATTCCATGCA ACTGGCAGAT GCTTTAATTG GAGCTACAGC AATCGCTCAT
GGTCTTACTG TTCTCACGGG AAACGATAAA CACTACAAAG TAATGAAGGA TTTTCACATA
AAGAAGTTTG TGCCATAA
|
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| Protein sequence | MVIDSDVLIW YMRGNEKAYQ LIENSYNFFI SVITYMELVQ GMRNKQELIK LRKALNAWNA
QILYVSEEIS AKAMFYVEQH FLSHSMQLAD ALIGATAIAH GLTVLTGNDK HYKVMKDFHI
KKFVP
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