| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0176 |
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| Symbol | thrS |
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| ID | 6461697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 170514 |
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| End bp | 172487 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642726471 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_002017131 |
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| Protein GI | 194335337 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACA ATCAGGATAT ACTGGCTGTA ATAGCCCTTA CCCTTCCGGA CGGGAGTGTA
AAAACTTTTC CCATCGGCAC AACCGGCAAT GACGTTGCGC TCTCCATCGG ACGCAAACTT
GCACAGGATG CCCTTGCACT CAGGGTCAAT GGCGTTGCGA TTGACCTCTC GACACCTCTT
ACTGCTGATG CAGCAATAGA AATCATTACC TTCAGCTCCC CTGCTGGACA GGATATTTTC
TGGCACAGCT CAAGTCATCT CATGGCGCAG GCCATTGAGG AGCTCTATCC CGGCAGCAAG
TTCGGCGCAG GCCCCTCCAT CGAACAGGGA TTCTACTACG ATGTAGCCTC AACGCACCGC
TTCCGCGAAG AAGATCTCCG CAAGATCGAA GAGAGAATGC TGGAGATCAG CAAGCGCGAT
ATACAGATCC GGCGCGAAGA GATGAGCCGC ACCGACGCCA TAGAGTTTTT CAAAACCGTT
CGGAACGACC CCTACAAGGT TGAGATTCTT GAAGATACCC TGAAAGAGGT GGAGAGGGTT
TCGCTCTATC ACCAGGACGG TTTTACCGAC CTCTGCATCG GGCCGCACAT CCCCTCAACC
TCGAAAGTGA AGGCTGTTCT GCTCAGCAAT ATCTCCTCCT CCTACTGGCG CGGTGATTCT
GCACGCGAGA ACATGCAGCG CATTTATGGC ATCACCTTTC CATCCGAAAA GCTGCTGAAA
GAGCATGTTG CCCGGCTTGA AGAGGCTAAA CGACGGGACC ACCGCAAACT CGGCGCCGAA
CTGGAACTCT TCATGCTTTC GCCTGAGGTG GGAAGCGGTC TGCCGATCTG GCTGCCGAAA
GGGGCCATCA TCCGCAATGA ACTTGAAACC TTCCTCAAGG AGGAGCAGCG CAAACGCGGC
TATCTGCCCG TCTATACGCC GCATATCGGC AATATTGAAC TCTACAAGCG TTCAGGCCAC
TATCCCTACT ACAGCGACTC GCAGTTTCCG CCGCTGACCT ATCACGATGA AGAGGGCAAG
CAGGAGCAGT ATCTTCTTAA ACCGATGAAC TGCCCGCACC ACCACCTCAT CTACAGCTCA
AAGATGCGCA GTTACCGCGA TCTGCCCCTC CGCCTGACGG AGTTCGGAAC CGTCTATCGC
CACGAGCAGT CAGGAGAACT CAATGGTCTT GTACGTGCAC GCGGATTTAC GCAGGATGAC
TCGCACATTT ACTGCCGCCC CGATCAGCTT GTTGACGAGA TCTGCAGCGC CATTGAACTG
ACACAGTTTG TCTTTGGAAC GCTCGGCTTT TCAGAGGTGC AGACCCGCCT CTCCATGCAC
GACCCGGAAA ACCAGGCAAA GTATGGTGGT ACCGCCGAAG TGTGGGAACA GGCCGAGAAA
GATGTACAGG AGGCTGCCGA CCGCATGGGC ATCGACTACT TTATCGGCGT CGGCGAAGCA
AGCTTCTACG GCCCGAAAAT TGACTTTATC GTGCGTGACG CCCTTGGCAG AAAGTGGCAG
CTCGGCACCG TCCAGGTTGA CTATGTCATG CCGGAACGGT TCGACCTCAC CTATACCGGA
AGCGATGGCC AGAAACACCG CCCCGTTGTC ATTCACCGTG CCCCCTTCGG TTCCATGGAG
CGTTTTATCG GCGTCCTCAT CGAGCACACC GCAGGGAACT TCCCCCTCTG GCTCGCACCC
GTTCAGGCTG TGGTACTCCC GATTGCCGAA GATGTTCTCG ACTATGCAAA AAGCGTACAC
CAGGCGCTCC TCGCAGCAGG AATCCGCGCC GAACTTGACA CCAGAAGTGA AAAAATCGGC
AAAAAAATCC GCGACGCCGA AGTGAGCAAA ATCCCCTGCA TGATTGTCAT CGGACAAAAA
GAGCAGGAGA GCGGCGAAGT ATCGTTACGC CGTCATCGCA TCGGTGATGA AGGGCGATTC
AGCGTAAGCG GACTGATCGA AAAACTCAAG ACAGAGATCA CCGGAAAATC CTGA
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| Protein sequence | MSDNQDILAV IALTLPDGSV KTFPIGTTGN DVALSIGRKL AQDALALRVN GVAIDLSTPL
TADAAIEIIT FSSPAGQDIF WHSSSHLMAQ AIEELYPGSK FGAGPSIEQG FYYDVASTHR
FREEDLRKIE ERMLEISKRD IQIRREEMSR TDAIEFFKTV RNDPYKVEIL EDTLKEVERV
SLYHQDGFTD LCIGPHIPST SKVKAVLLSN ISSSYWRGDS ARENMQRIYG ITFPSEKLLK
EHVARLEEAK RRDHRKLGAE LELFMLSPEV GSGLPIWLPK GAIIRNELET FLKEEQRKRG
YLPVYTPHIG NIELYKRSGH YPYYSDSQFP PLTYHDEEGK QEQYLLKPMN CPHHHLIYSS
KMRSYRDLPL RLTEFGTVYR HEQSGELNGL VRARGFTQDD SHIYCRPDQL VDEICSAIEL
TQFVFGTLGF SEVQTRLSMH DPENQAKYGG TAEVWEQAEK DVQEAADRMG IDYFIGVGEA
SFYGPKIDFI VRDALGRKWQ LGTVQVDYVM PERFDLTYTG SDGQKHRPVV IHRAPFGSME
RFIGVLIEHT AGNFPLWLAP VQAVVLPIAE DVLDYAKSVH QALLAAGIRA ELDTRSEKIG
KKIRDAEVSK IPCMIVIGQK EQESGEVSLR RHRIGDEGRF SVSGLIEKLK TEITGKS
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