| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0124 |
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| Symbol | |
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| ID | 6461968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 140046 |
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| End bp | 140942 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642726434 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_002017094 |
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| Protein GI | 194335300 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTATGGA GGCGTCGGTG GATTTCTTCT TCATACGCCG ACTCCCTGTT ACCTGAGGAT
ATTCCGCAGG GCTTCGTCGG TTTCTCTTGC CTCCAGCTCG ATGGCGTTCA GCTCTTCGGC
GATCTCGCAT TTCACAAGAA GGCCGCCGGA ACCGGTGCAG GGATCGTAGA TCTCCATGCC
CGGTTCCGGC GCAAGCACGC GTGGCATGAT GGTGGCAACT TCGGAACAGT AGTCATTCGA
AACGGGCAGG GAAAAAATCG CAGAAACAAT TTGCATAAAA GAACGATCGT TCTTAAATTC
GATCAAAGAG AACACATTAT GTCAAGACCG AAAAAAGTCA CCGACTCTGA AATACTCGAT
GCAATCGAGC GGGTTGTTGT CAAGCATGGT GCATCCCGCC TCTCCATCGA TGCTGTGGCT
CAGGAGGCAG GAATCAGCAA ATCGAGGGTG GTTTACGACT ACAAATCCAA GACCGCCCTG
CTCGAAGCTC TGATCGACCG GCAGTTTGAG CGCGATACGG CACGCATCGA ATCAGCGCTT
GTCGAGTGCG CCGACACCCC TCACCCCGAA CTTTTCGCAC GTCTCAAAAT TGCCGAGCGT
GCCTTGGATG ATACGGAACG CGCTGTCTCC ATGGCTATCA CATCCTCCAT GTCGAGCGAG
GAGTCGCTTC GGCAGCGGAT GCTGAAGTGG ATAGAGCGGG ACTTGCTTGC CATGGATAGC
GGAGCGAAGC CTGAAGCGGC CCGCATGGCC TATTTTGCCT TTATAGGATT CAGTTGCCAC
GAGTGGTTCG GCCTTGTCGA CAGAAGCGAC GAGGAGCGTC TGCCCTTCCT GGAACAGATC
CGGAAGATGT ATATCGGTTA TCCTGAAAGC CATCCGACAA CCACACCAAA CCCATAA
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| Protein sequence | MVWRRRWISS SYADSLLPED IPQGFVGFSC LQLDGVQLFG DLAFHKKAAG TGAGIVDLHA
RFRRKHAWHD GGNFGTVVIR NGQGKNRRNN LHKRTIVLKF DQREHIMSRP KKVTDSEILD
AIERVVVKHG ASRLSIDAVA QEAGISKSRV VYDYKSKTAL LEALIDRQFE RDTARIESAL
VECADTPHPE LFARLKIAER ALDDTERAVS MAITSSMSSE ESLRQRMLKW IERDLLAMDS
GAKPEAARMA YFAFIGFSCH EWFGLVDRSD EERLPFLEQI RKMYIGYPES HPTTTPNP
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