Gene Paes_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2228 
Symbol 
ID6459678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2408505 
End bp2409089 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content55% 
IMG OID642726204 
Productrare lipoprotein A 
Protein accessionYP_002016877 
Protein GI194335017 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CAGCGTTCCT CTGCCTCGGC GCAGTCATCG GACTGAGCTC ATGCTCCGTG 
GTAAAAACCA CCGCAAATAC TGCAGCCTCA ATAGGCTCCT TTGCCGTCAA GACCGTCGCT
TCTCCATTCA CCAGCGACGA GATCGAGTCC ATTGACGGGC TGAGCCCCGA AGAAGCCGTC
CGGCAGGGCA GAGTAAAAAA CGCGCCCTAC GTCGTTCACG GCAGAACGTA TGTACCGATG
AGCATGGAGG AAGCACAGAA TTACAGCGAA ACAGGCATTG CCTCGTGGTA CGGCGAAGAA
ACCAGAAGCA AACCGGGAGG GACAATCACG GCAAACGGCG AATCGTTCCA TCCAGACAGG
GTCAGCGCTG CCCACAAGTA CCTGCCGCTT CCCGTCTATG TCAGGGTCAC CAATCTTGAA
AACAGAAATT CCATCATTGT GCGCGTCAAC GACCGCGGAC CGTTTGCACA TGAAAGAGTT
ATCGACCTGA GTGCCGGAGC CGCTAAAAAG CTCGGGTTCT ACGATTACGG AACCGCCCGG
GTCAAACTGG AAGTAGTCTC GCTGACCGCA GACGCCAAGC CCTGA
 
Protein sequence
MKKTAFLCLG AVIGLSSCSV VKTTANTAAS IGSFAVKTVA SPFTSDEIES IDGLSPEEAV 
RQGRVKNAPY VVHGRTYVPM SMEEAQNYSE TGIASWYGEE TRSKPGGTIT ANGESFHPDR
VSAAHKYLPL PVYVRVTNLE NRNSIIVRVN DRGPFAHERV IDLSAGAAKK LGFYDYGTAR
VKLEVVSLTA DAKP