Gene Paes_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2176 
Symbol 
ID6458586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2349220 
End bp2350209 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content54% 
IMG OID642726152 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_002016825 
Protein GI194334965 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACA AATCGGCAGG AGTTGATATC AGTGCGGGAG AAGAGTTTGT CCGTCTCATC 
AAACCGCAGG TGCGGCAGAC ATTCACCAGC AGGGTGATGA CCGATATCGG CGCGTTCGGC
GGCTTTTTTC AGCCTGATTT TTCCGGGTAC AGAGAACCCG TACTGGTCAG CAGCATTGAT
GGCGTCGGAA CCAAGCTCAA GGTTGCCGCT GAAATTGGAA AGTATGATAC TATTGGCTCC
TGTCTGGTTA ACCACTGTGT CAATGATATC CTTGTATGCG GTGCACGCCC GATGTTTTTT
CTCGACTACT ATGCCTGCGG AAAGCTCAAG CCTGCAATGG CCGCGGATGT GGTCAAGGGT
ATGGTGAGCG CCTGTAAGGG GAATTCCTGC GCGCTGATCG GAGGCGAGAC CGCTGAAATG
CCGGGGGTCT ATGCTGAAGA TGACTTCGAT CTTGCCGGGA CGATTGTCGG GATGGTTGAC
CGCGAACTGG TTATAAACGG GGCCTCTATC GTCGATGGTG ACGTGATGAT CGGTCTGCCT
TCAAGCGGCT TGCATACCAA CGGTTACTCT CTTGCAAGAA AGGTGTTCGA GGGGCGGCTT
GGTCACACGT TTGAAGGGAT GGAGCGCCCG GTAGGCGAGG AGCTGCTTCA GGTTCACCGC
TCATATCTTA AGGTGGTTGA TGAATGGTTG ACGTCGAACG ATCTCCACGG TATGTCGCAT
GTGACCGGCG GAGGACTTGT CGGCAACACG ATGCGCATTA TTCCTTCGGG CCTGAAGCTT
GATATTGACT GGACTGCCTG GCCGGAACCA CTGATCTTCG ATGTGATCCG CAAAGAGGGA
GGTGTTCCTG AAGAGGATAT GCGCAGAACC TTCAACCTGG GGATCGGTCT GGTCCTTATC
GTTGCAGCAG AAGCTGTCGA CGATATCATG GCCGGTTTGA AAACCAGGCA GGAAAATGCG
TACATTATTG GACGTATCGC CGCCGAATAG
 
Protein sequence
MDYKSAGVDI SAGEEFVRLI KPQVRQTFTS RVMTDIGAFG GFFQPDFSGY REPVLVSSID 
GVGTKLKVAA EIGKYDTIGS CLVNHCVNDI LVCGARPMFF LDYYACGKLK PAMAADVVKG
MVSACKGNSC ALIGGETAEM PGVYAEDDFD LAGTIVGMVD RELVINGASI VDGDVMIGLP
SSGLHTNGYS LARKVFEGRL GHTFEGMERP VGEELLQVHR SYLKVVDEWL TSNDLHGMSH
VTGGGLVGNT MRIIPSGLKL DIDWTAWPEP LIFDVIRKEG GVPEEDMRRT FNLGIGLVLI
VAAEAVDDIM AGLKTRQENA YIIGRIAAE