Gene Paes_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2157 
Symbol 
ID6460587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2331494 
End bp2332621 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content56% 
IMG OID642726134 
Producthypothetical protein 
Protein accessionYP_002016807 
Protein GI194334947 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.296122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTCT CTCGAAGACA ATTTCTGGTT CGTACGGCAA CGTGTGCGGT TTTGTTCGGG 
CTCGCACCGG GGCTTTCGGC CTGCAATGGC GTGATTCGGC ATGATAGTCG TAAAGGGGAG
GCGTACGATG CTCTTCTGGG GGCTATCGGC CAGGAACGGA CCGATATGCT CTGGTATGCG
TCGCTTGCCC CGAGCAGCCA TAATGTTCAG CCCTGGACGG TGATTATCGA TTCTGATCGA
TGGACCATCG GGTCTGCCAG TTCCCGCTGG CTGCCGGCTG TGGATCCTGA AAACAGGGAG
ATGCTGCTGT CTGTCGGAGC GTTTGTGGAG AATCTTACGC TTGCAGGGTC ACGTTTTGGT
ATAGGTGTCC GCTCCAGGGT GATTGCGCAA AGTCCGAACG ATCCCGAGCT TGTGGAACTG
CAGCTGAGCA AGGTTTCGCC ATCGGGCTAC CCGCTCGAGC GACTTGAAAA GCGCATGACG
TTACGCGGTC CGTTTCAAAG TCAGGAGATT GAGGCGTCCG ATTTTTCTTC GCTTATCGAC
GGCGACGAAG GGTTTTTTTA TTTTCCGCCA GCCTCATTGG AGGCAGCATG GCTCGATGAG
GCAACCATTG CAGCTAATCG TCAGCAGGTC AAACGGCAGG ATGTTGCATC GGAGCTTGCC
TCCTGGATAC GATGGTCGGA TGCTGATGCG CGTCAATACC GCAACGGGCT GACCCCGGAA
TCCATGGGTA TTACCGGTCT TACCGGGTGG TATGTTCGCA ACTTCTATGG GCGCGACGAT
GTGCTGAACC AGGATTTTCG GAAAAATACA GTTAACAGGG TTGTTTCGCA GGTGGCCGAA
AGCGGTGGCT GGATTGTGGT GACGTCGGAT AACGGCACTC CATCAGCGTT GATCCAGGCA
GGCAGACGCT TCGAGCGTAT GCTTCTCAAG GCCAGGGGAC TTTCTATCGG CATTCATCCC
ATGTCGCAGG TGCTCGAAGA GGCTCCCTGG AAGCGCGACG TGCGTGATGC ACTGAAGGTA
CAGAAATCGC CCCAGCTGCT TCTGCGTGTG GGTTATACCA GAGACTATAC TGATCCTGTC
AGTGTGAGGA TGCCGCTCGA TCGCGTAGTC AGTTTTCGTG CAGGGTGA
 
Protein sequence
MGLSRRQFLV RTATCAVLFG LAPGLSACNG VIRHDSRKGE AYDALLGAIG QERTDMLWYA 
SLAPSSHNVQ PWTVIIDSDR WTIGSASSRW LPAVDPENRE MLLSVGAFVE NLTLAGSRFG
IGVRSRVIAQ SPNDPELVEL QLSKVSPSGY PLERLEKRMT LRGPFQSQEI EASDFSSLID
GDEGFFYFPP ASLEAAWLDE ATIAANRQQV KRQDVASELA SWIRWSDADA RQYRNGLTPE
SMGITGLTGW YVRNFYGRDD VLNQDFRKNT VNRVVSQVAE SGGWIVVTSD NGTPSALIQA
GRRFERMLLK ARGLSIGIHP MSQVLEEAPW KRDVRDALKV QKSPQLLLRV GYTRDYTDPV
SVRMPLDRVV SFRAG