| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2058 |
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| Symbol | rpsC |
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| ID | 6460087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2244665 |
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| End bp | 2245420 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726042 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_002016715 |
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| Protein GI | 194334855 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00124748 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.255543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGGTCAGA AAGTTAATCC TACTGGATTT AGATTAGGGA TTATCAGGGA CTGGACATCC
AGGTGGTATG ATGATTCGCC TGTGATTGCT GAAAAACTGA AGCAGGATCA TGTTATCCGT
AACTATGTCC AGGCACGCTT GAAAAGAGAG CGCGCCGGTA TTGCAAAGAT TGTTATCGAG
CGTACGACAA AACATATTAA GATCAATATC TTTGCGGCCC GGCCGGGCGC CGTTGTCGGC
AGAAAGGGAG AGGAAATCAA CAATCTGTCC CAGGAGTTGA GCCGTATTAC CGGACGAGAG
GTTAAGATCG ATGTTATCGA AGTGATCAAG CCAGAGATCG AAGCTCAGCT TATCGGCGAA
AATATCGCTT ATCAGCTTGA GAACAGGGTA TCTTTCCGTC GTGCTATGAA GCAGGCTATC
CAGCAGGCTA TGCGTGCAGG TGCAGAGGGT ATCCGTATTC GCTGTGCAGG AAGGCTTGGT
GGTGTTGAAA TTGCACGTTC AGAGCAGTAC AAGGAAGGCA AGATTCCGTT GCATACATTG
AGAGCCAACG TTGATTATGC GAGCGTTACC GCGCACACCA TTGCCGGAGC GATCGGAATC
AAGGTATGGG TCTACAAGGG TGAGGTTCTC GTTCAGCGCA TCGATGCTAT TGAAGAGGAT
GAACTCAAGA AAATCAAGGA TCGCCGCGGT GAGCAGCGTT CACGTGGACG CGACAGCCGT
AACAGAAGAC GTCGTAAACC GAGACAGACG ACCTGA
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| Protein sequence | MGQKVNPTGF RLGIIRDWTS RWYDDSPVIA EKLKQDHVIR NYVQARLKRE RAGIAKIVIE
RTTKHIKINI FAARPGAVVG RKGEEINNLS QELSRITGRE VKIDVIEVIK PEIEAQLIGE
NIAYQLENRV SFRRAMKQAI QQAMRAGAEG IRIRCAGRLG GVEIARSEQY KEGKIPLHTL
RANVDYASVT AHTIAGAIGI KVWVYKGEVL VQRIDAIEED ELKKIKDRRG EQRSRGRDSR
NRRRRKPRQT T
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