Gene Paes_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1978 
Symbol 
ID6459910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2170028 
End bp2170918 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID642725963 
Producthypothetical protein 
Protein accessionYP_002016637 
Protein GI194334777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.255672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.716267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAA CCAATGACGA CCGTCTTGTT GAATTTCTTC TGCAGTGTCA GCCCGGACCG 
CCAAAAACAC GGGGTACCTG GCAGGTTGAT CACGAGGGAA AGCCTTTTCT TCTGCCATCG
ATCGGCGGTA TAACGCTCAA TGTGCAGGTC GGTGATTCCT GTTTCGGGTG GGCCGGCGAC
CACATTGAAC CGGGGGTAAG CTGTACCGCC GATACGCACA AGCCTTTTGA GCATCCCAAT
ACATCGCTGC AGCTCTACTC CTGCACCGGT AACAGGGCGG AGATTGTTTC TGGTGAGGCC
AAAGGGGAGA GCGGTGTGGT GATTGGTCAT CATGGCGGTT CGGAACATAT TATCGTCGAT
TTTGCGCGGG AGGTAAAAGA AAAGCTGACC TACAACGATA CGATTATTGT TCGGGCTAAA
GGGCAGGGGT TGAAGCTTAC TGATTATCCT GATATCTCGG TTTTCAATCT TGATCCTGAG
TTGCTGCAAC GAATGCCAAT CCGTCTTGGC GGCGACGCTG TGCTTGAAGT GCCGGTGACG
ACTGTTGTTC CTGCGGCATG CATGGGTTCG GGGGTCGGGG CGGCGCATGT CGCCAAGGGG
GATTACGATA TTATGACGAG CGATGAGGAA ACGGTCAGAA AGTATCATCT CGACGCGCTC
CGCTTCGGTG ATTTTGTCGC GCTTATGGAT CATGATAACC GGTATGGCAG AGCGTATCGG
CAGGGAGCGG TATCGATAGG GATTGTGGTG CATAGCGACT GCCTTGTTGC CGGTCATGGA
CCGGGAGTGA CAACACTCAT GACGACGGCG TCATCTGCTA TCCGGCCGGT TATCGATCCA
TCGGCAAATA TTGCTGATCT TCTGCAGATC GGTACGCGTC TCGATTCCTG A
 
Protein sequence
MLKTNDDRLV EFLLQCQPGP PKTRGTWQVD HEGKPFLLPS IGGITLNVQV GDSCFGWAGD 
HIEPGVSCTA DTHKPFEHPN TSLQLYSCTG NRAEIVSGEA KGESGVVIGH HGGSEHIIVD
FAREVKEKLT YNDTIIVRAK GQGLKLTDYP DISVFNLDPE LLQRMPIRLG GDAVLEVPVT
TVVPAACMGS GVGAAHVAKG DYDIMTSDEE TVRKYHLDAL RFGDFVALMD HDNRYGRAYR
QGAVSIGIVV HSDCLVAGHG PGVTTLMTTA SSAIRPVIDP SANIADLLQI GTRLDS