Gene Paes_1844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1844 
Symbol 
ID6460198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2017882 
End bp2018682 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content53% 
IMG OID642725828 
Productcytochrome c assembly protein 
Protein accessionYP_002016503 
Protein GI194334643 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1138] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTGGG TCGAGTTTCC TTATGCCGCA TATACCGCCA TAGCCTTCTG GGCATGCGGC 
GGGGCAGTTT CTCTTGCCGG GGTCAGAAAG CCAGGGCTGA AGGTTCCCGG ACTGCTCCTG
ATGCTTGCCG GTTCAGCGGT CATGGTGCTG TTTCTTATTC TGTTCTGGGT CGGTCTGGAC
CGTCCCCCAC TTCGAACGCT GGGAGAGACC CGTCTCTGGT ATGCGATACT GATTCCTCTT
GTGGGTTTTC TGGTGGAATA TCGCTGGAAA ATAACATGGC TGAAATACTA CTGTGTGGTG
TTAGCAGCAC TGTTTCTCAG TATCAATCTC ATGTCTCCCG ACCTCTACGA TAAAAGTCTT
ATGCCTGCGC TGCAGAGTGT CTGGTTTATA CCTCATGTGG TGGTCTATCT TGTCGGTTAT
GTGCTGCTTG CCGCCTCATC TGCAGCGGCA TGGCATACGC TGTTGCGTTC TCCACGAGGC
GGTATGGGGG AAACAGGCGA GAGTGTTTCG CACTATCTTG CGCTGCTTGG CTTTGTTTTT
CTTTCCTTCG GGCTGGTTTT TGGTGCGCTC TGGGCCAAAG AGGCATGGGG GCATTACTGG
ACCTGGGATC CTAAAGAGAC ATGGGCACTC ATCTCATGGC TGGTCTATCT GGGCTATATG
CACGCCAATG CCATGAACAT CGGTCGTCGT TCTCTTCAAT GGTATCTCGG GCTGGCTTTT
CTTGTGCTGC TGGTCAGCTG GTTCGGGGTC AACTACCTTC CATCAGCGCA GAACAGCGTG
CACAGTTATC AGTCTGTGTA A
 
Protein sequence
MTWVEFPYAA YTAIAFWACG GAVSLAGVRK PGLKVPGLLL MLAGSAVMVL FLILFWVGLD 
RPPLRTLGET RLWYAILIPL VGFLVEYRWK ITWLKYYCVV LAALFLSINL MSPDLYDKSL
MPALQSVWFI PHVVVYLVGY VLLAASSAAA WHTLLRSPRG GMGETGESVS HYLALLGFVF
LSFGLVFGAL WAKEAWGHYW TWDPKETWAL ISWLVYLGYM HANAMNIGRR SLQWYLGLAF
LVLLVSWFGV NYLPSAQNSV HSYQSV