Gene Paes_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1767 
Symbol 
ID6458896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1926752 
End bp1928095 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content43% 
IMG OID642725751 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_002016427 
Protein GI194334567 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0935149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG TAGTTGAGTT TATATTGAAC AGGTTTCCAT CGGTTAGGGA CAGGATTGAT 
GTGCATATGA TGGAGGTGAT TAATGGGGCG GCGGTTGCTC TTGTGCTGAA GGTTCTTGGA
GCGGGGTTGA CTTTTCTGTT CAATTTAGTG CTCGCAAGAA CTCTTGGGGC CGATGGGGCG
GGTCACTACT TCCTGGCGCT CACTGTAACG ACAATTGCTA CGGTTTTCGG GCGCATGGGG
CTCGATAATA CGCTGCTGCG CTTTACTGCT GCAAATGCAG CTGTCAATGA CTGGGTAGCA
GTTAAGGGTG CTTATGTGAA AGGAATGAAA CTGGCATTCA TTGCCTCATC CCTTTCTACA
GTTGCGGTGT TTGTTTTTGC CCCGGTTCTG GCGGACAAGG TTTTTCAAAA GCCTGAACTT
TCAATTCCAA TGCGCTGGAT GTCAGTGGCT GTAGTTCCGA TGACTTTTGT CATGTTGCAT
GCAGAGGGAC TTAAAGGGCT AAAGCGGATC AGGGATTCGT TTATTGTTTT TGGTGTGGGT
GTTCCTGCGA TTTCATTGAC AGTTCTCTTG TTGTTTGGTG CAAGGTATGG CGTTAATGGA
GCGATTTGGG CATATGCGTC AGGTGCGATA TTCACTTCGT TATTAGGTGT TATTCTCTGG
AACATTGCAA CGCCTAAGTT GCGGAAAGTG TCTGGTGTTT TTCGAACAAA CGATTTGTTC
AAGAGCAGCA TGCCGCTTTT CTGGATTGCT TCGTTGAGCA TGATGATTAA TTGGACAGCT
ACATTTGCTC TTGGTGTATG GGGTACACAG GAGGATGTTG GGATATTCAG TATGGCTTCA
AGAACAGCTA TGCTAACAAG TCTCATTTTG ACATCAGTTA ACAGTATATC GGCTCCCAAA
TTTGCTGAAT TGTATAAGAA AAAAGAAATA GCTGCATTGG GGGCGACTGC AAGAAATACA
GCTAAACTGA TGACAATTAT TGCCAGTCCA TTGTTATTGC TCTTTCTAGT TGCGCCACAG
TGGGTAATGG GGATGTTTGG TGAAGAATTT CCAAAAGGCG GTATTCTACT GTCGATTCTT
GCAATTGGCC AGTTTGTCAA TGTTGTAACG GGTTCTGTTG GATATTTACT GATAATGAGT
GGGAATGAAA AAGATATGAG AAATACAGTT GTTGTTGTTT CAGGTATCAG TGTATTACTA
AACGTGATTT TAGTGAAAGA ATTTGGCCTA ATAGGCGCTG CAATTGCTAC AGCAACTTGT
TTTTCGATGC AAAATATTAT TGCAACATAT ATTGTCTGGA GAAAGCTAAA GATATTAACA
ACGCCGTTAT GGTATAAGGC ATAG
 
Protein sequence
MEKVVEFILN RFPSVRDRID VHMMEVINGA AVALVLKVLG AGLTFLFNLV LARTLGADGA 
GHYFLALTVT TIATVFGRMG LDNTLLRFTA ANAAVNDWVA VKGAYVKGMK LAFIASSLST
VAVFVFAPVL ADKVFQKPEL SIPMRWMSVA VVPMTFVMLH AEGLKGLKRI RDSFIVFGVG
VPAISLTVLL LFGARYGVNG AIWAYASGAI FTSLLGVILW NIATPKLRKV SGVFRTNDLF
KSSMPLFWIA SLSMMINWTA TFALGVWGTQ EDVGIFSMAS RTAMLTSLIL TSVNSISAPK
FAELYKKKEI AALGATARNT AKLMTIIASP LLLLFLVAPQ WVMGMFGEEF PKGGILLSIL
AIGQFVNVVT GSVGYLLIMS GNEKDMRNTV VVVSGISVLL NVILVKEFGL IGAAIATATC
FSMQNIIATY IVWRKLKILT TPLWYKA