| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1749 |
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| Symbol | |
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| ID | 6459124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1908072 |
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| End bp | 1909853 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642725737 |
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| Product | TrkA-C domain protein |
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| Protein accession | YP_002016413 |
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| Protein GI | 194334553 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.123967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0276756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCT TCGAATCCCT CATTGTTTTT TCCGCCATTC TTTTCATCAT TGTCTCTCTG
TACAAGGAGT TCATGAACCC TGCGCTTACG TTTATTGTAG GGGTATTAGG GCTTGGGGTG
GCTGGTATTC TTGAACCGAG AGAGATTCTT GCTGGGTTTG CTAATGAGCA GATTGCGGTG
ATTGTGCTAC TGTTGCTTGT TGGTGAGGTG GTGCGAAAGA CTGGGGTGAT CGACCAGATA
TTCGACCTCT TTTTCAGGAG TTCCAGAACA TATCGGCAGT TTTTGTTTCG CATGACAGCT
ATTGTCAGCG GGTTGTCAGC TTTTTTGAAC AATACGCCGC TTGTAGCGGT GATGATGCCG
TATGTGCATA ACTGGTCGAA AGGTGAAGGA CGGCCAACAC CGTCGAAGCT GTTGATTCCG
TTGTCTTATG CTTCTATTCT CGGTGGATGT GCCACGCTGA TCGGGACATC CACCAACCTG
ATTGTGAACA GTATGATTAC CGAGCAGCAG GTGATTCAGG GGTTGCGACC GTTGGAGATG
TTCGAGTTTG CCTGGGTCGG GGTGCCGATG ATCGTGCTTG GTGGGTTGTA CCTGGTTGTT
GTCAGTGGTC GGTTGTTACC CGAAAACCGG GATTATTTTG CCGAGTTCAA GGCAAATACG
AGACAGTACC TTGTCGAAAC ACGTTTGAGG CCGGGGGCTG GTTTAGTTGG TAAAAGCGTG
AGTGAGGCCG GTCTTCGTAA TCTGCAGGGT TTGTTTCTTG TCAAGGTTTT GCGTGAAGGC
AATGGTATTG CGCCTGTGCA TCCCGAGTTG AAACTGCGGC AGGATGATAT TCTTGTTTTT
GCCGGGGATA CATCGACGAT TGCTGATTTG CTTACTGCAT ATCAGGATCT TCAGCCTGTA
GAAGTAGAGT TGTTTGGGGG GAATGGGGCT GGTATGCATA TGGTCGAGGG GGTTATTGCT
TACAACTCTT CTCTTGAAAA CAAGACGATA AAGGAAAGCC AGTTCAGGAG CCAGTATGAT
GCTGCGGTTG TTGCTGTGCT GAGAGGTGGT GAAAGAATAT CCGGGAAGAT TGGGTCGATA
TCTCTGAAAG CTGGTGATGT GCTTCTGTTG CTTGCAGGAC GGGATTTCCA GGAGTTGACC
CGTGAGAACC GGGATTTTTA TGTGCTCTCG GAAACGAGAA AACCTCCGAA AGTTGAAACA
TGGAAAGCGG TGTTGCCGAT TGCGGGGTTG GTGAGTGCGA TAGTGCTTTC AACCCTGAAG
ATTGTGCCAC TCTTCCTTTC TGTATCGGTA TTGCTCGCTG TTTTACTTCT GTTCAGGGTT
GCTTCGGCAA AAGATATTGT TGGGGGGATC GATTATAACC TTGTGATGAT TATTGCCATG
TCGCTTGCGC TTGGAGTGGC GATGACAAAA ACAGGGGTTG CTGAGGTTAT TGCGTCAAAT
ATGTTGCTAC CAATGATGAG GTTCGGCAAT ATCGGGGTGA TGATCGGGGT CTATGGGGTT
ACTGCAGTGC TGAGCTCATT GATGCTGAAT AAGGCTGCCG TTGCTTTGTT GTTTCCGGTG
GTGTTGACAT TAGCGCAGCA GACCGGTATG GATCCACTGG GCTTGATTCT CTGCATGACG
TTTGCTGCTG CTGCAAATTT TCTATCTCCA GTAGGTTTTC AGACGAATAT GATGGTGTAT
GGACCTGGAG GGTATTCATT CAAGGATTTT TTCAGGATAG GACTGCCATT GACGATGATG
TATATGGTGG TGACTGTTGG AGTGTTGAGT GTTATGTATT GA
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| Protein sequence | MLSFESLIVF SAILFIIVSL YKEFMNPALT FIVGVLGLGV AGILEPREIL AGFANEQIAV
IVLLLLVGEV VRKTGVIDQI FDLFFRSSRT YRQFLFRMTA IVSGLSAFLN NTPLVAVMMP
YVHNWSKGEG RPTPSKLLIP LSYASILGGC ATLIGTSTNL IVNSMITEQQ VIQGLRPLEM
FEFAWVGVPM IVLGGLYLVV VSGRLLPENR DYFAEFKANT RQYLVETRLR PGAGLVGKSV
SEAGLRNLQG LFLVKVLREG NGIAPVHPEL KLRQDDILVF AGDTSTIADL LTAYQDLQPV
EVELFGGNGA GMHMVEGVIA YNSSLENKTI KESQFRSQYD AAVVAVLRGG ERISGKIGSI
SLKAGDVLLL LAGRDFQELT RENRDFYVLS ETRKPPKVET WKAVLPIAGL VSAIVLSTLK
IVPLFLSVSV LLAVLLLFRV ASAKDIVGGI DYNLVMIIAM SLALGVAMTK TGVAEVIASN
MLLPMMRFGN IGVMIGVYGV TAVLSSLMLN KAAVALLFPV VLTLAQQTGM DPLGLILCMT
FAAAANFLSP VGFQTNMMVY GPGGYSFKDF FRIGLPLTMM YMVVTVGVLS VMY
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