Gene Paes_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1744 
Symbol 
ID6460818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1904750 
End bp1905463 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content39% 
IMG OID642725733 
ProductNucleotidyl transferase 
Protein accessionYP_002016409 
Protein GI194334549 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0895835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTC CTTGCATTAT TCTTGCTGGT GGTCTGGGTA CTCGGTTACG TTCTGCTTTG 
CCAGATTTAC CAAAATGCTT AGCCCCTGTA GCTGGTCGTC CATTCTTGGA ATGGCAGATG
AAATCTCTTT TCAGACGAGG TATACATCAC TTTGTTTTGG CATTGGGCTA TGGTGCTGAT
AAGATAATAG AGGTATTACA CCAACCTTGG GCAAAGGAGA TGTCTATTGA TTATGTTATT
GAGAAAGAGC CGCTTGGCAC TGGTGGAGCT ATACGATTTG CGATGACAGA TAAATTGATC
GATGAAGTAT TGGTTGTTAA TGGTGATACT TTCTTAAATG GTGATCTTTC ATCGCTTCTT
GAACCTCTAA ATAGAGGATC TGGCGAGTTC ATGCGTATGG CTGCAATTCA TGTTTCTGAT
CGTTCGCGTT ATGGTGGGGT TTTAGTTGAT CAGGATAAGA ACGTACTGGC ATTTATAGAG
AAGGGTCGGC ATGATTCTGG TTTGATAAAT GCTGGAGTAT ATCACATTCA TATTTCTGTT
TTTGAGGAAT ATTTAATGCC CTCATTTTCA CTTGAGGCAG AAGTTATGCC AATATTGGTC
AAGAAAGGTA ATCTTAAATT CTGTGAGGTC TCAGGTCCAT TTGTTGATAT TGGTGTTCCT
TCAGATTATT ATTCTTTTCA AGCACAACAT AAATATTATG GCATCGAGTG TTAG
 
Protein sequence
MSIPCIILAG GLGTRLRSAL PDLPKCLAPV AGRPFLEWQM KSLFRRGIHH FVLALGYGAD 
KIIEVLHQPW AKEMSIDYVI EKEPLGTGGA IRFAMTDKLI DEVLVVNGDT FLNGDLSSLL
EPLNRGSGEF MRMAAIHVSD RSRYGGVLVD QDKNVLAFIE KGRHDSGLIN AGVYHIHISV
FEEYLMPSFS LEAEVMPILV KKGNLKFCEV SGPFVDIGVP SDYYSFQAQH KYYGIEC