Gene Paes_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1685 
Symbol 
ID6459792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1838117 
End bp1838542 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content50% 
IMG OID642725673 
Productprotein of unknown function UPF0047 
Protein accessionYP_002016350 
Protein GI194334490 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACG TTACCCACAC CATCAACCTG GAAACAACAG AACCGGTTCA TATCGTCGAT 
ATAACAGAAG AGGTCAAAAA AGCCCTTACG GCAAGCTGCC TCAAACAGGG ACAGATGACC
ATCATCAGCC AGCACACCAC TGCATTCGTC AATATCAACG AATACGAACC CCGTCTTATG
GATGATATGG TCACCTTCCT TAAAAGGCAA GTCCCCCGGG ACGGCAACTA CGCCCATAAC
ATTGCGCCGA TCGACGGCCG CGACAATGCT CACTCTCATC TGATGGGGCT CTTCATGAAC
AGCTCAGAAA CCATCCCCTT CAACCAAACA GGCCTCATGC TCGGCCAATG GCAATCAATA
TTTTTCATAG AACTTGACGG CCCCAGACCA AAACGCAGCA TCCTCCTCCA CATGGCAGGA
GAGTAG
 
Protein sequence
MKYVTHTINL ETTEPVHIVD ITEEVKKALT ASCLKQGQMT IISQHTTAFV NINEYEPRLM 
DDMVTFLKRQ VPRDGNYAHN IAPIDGRDNA HSHLMGLFMN SSETIPFNQT GLMLGQWQSI
FFIELDGPRP KRSILLHMAG E