Gene Paes_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1655 
Symbol 
ID6458570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1802389 
End bp1802883 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content49% 
IMG OID642725643 
Productlipoprotein signal peptidase 
Protein accessionYP_002016320 
Protein GI194334460 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.583994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA TGGGCATGAT ATGGTTTGTC ACCATCGCCA TCTCGGTCAT CATCCTTGAC 
CAGATCACAA AAATACTGGC TATCTCCTAT CTGAAAGAGC CCGGCAGCAT AACGATCATA
CCCGACTGGT TCAAGCTTAC CTATACTGAA AACACCGGAA TAGCCTTCGG TGTAGACCCG
GGTTCACGAA TGATTCTTGT AGGCGGGACC GCCGCTATTC TTGCAGGAAT TCTGATCTAT
GTTCTCCTTT CCAAAAACAG AACGCCCGGA TTTCTCACTG CGTTCGCGCT TATTCTGGGG
GGAGGGGCGG GAAACCTGCT CGACCGGGCA ACCTCAGGCA GAGTGACAGA CTTTCTGCAT
CTCGATCTCT ATAACGGCTA TATTTTCAAT ACATGGATGT CCCTCTGGCC TGTCTTCAAT
ATCGCCGATT CGGCCATCAC TATAGGCGCA TTCATGCTGC TGCTATGGCA TAACAGCATT
TTTTCAGACA GCTAA
 
Protein sequence
MKHMGMIWFV TIAISVIILD QITKILAISY LKEPGSITII PDWFKLTYTE NTGIAFGVDP 
GSRMILVGGT AAILAGILIY VLLSKNRTPG FLTAFALILG GGAGNLLDRA TSGRVTDFLH
LDLYNGYIFN TWMSLWPVFN IADSAITIGA FMLLLWHNSI FSDS