| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1405 |
|---|
| Symbol | |
|---|
| ID | 6460229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1529728 |
|---|
| End bp | 1530309 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642725390 |
|---|
| Product | pentapeptide repeat protein |
|---|
| Protein accession | YP_002016073 |
|---|
| Protein GI | 194334213 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.207308 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACG ATAACAACGA ATTCACCGAA AACAGGGTTT TCAAGACGGT CTCTTTTGGG
GAAGACAACC CTTTGCATGG CACCTATGAA GAGTGTCGCT TCATCCACTG CAACCTCAAT
ACGACTGACC TTTCAGACAT CACATTCAGA AACTGTTCAT TTGAGAGTTG TGACCTCTCC
CTTGCCAGGC TGAGAGATAC CGGTTTTCAG GACGTGCATT TTTTGAACTG TAAACTGCTC
GGGTTGAACT TCAGCGAGTG CAGAAAACTG CTGCTTGAAT GCAGGTTCGA AAGCTGCATG
CTCAAACTCT CGGTCTTCCA CCAACTCGAC CTCAGAACCA CCAGCTTCAA CGACTGCAAT
CTGCAGGAAA CGGATTTTAC CGCTGCCGAC CTCAGCGCCG CGGTTTTCGC GAACTGCGAT
CTCATGCGCG CAACCTTTGA GCGCACCAAT CTCGAAAAAG CCGATTTCCG CTCAGCCTTC
AACTATATCA TCAACCCCGA AAACAACCGC ATCCGCAAAG CCCGCTTCAG GATGCCCGGC
GTAACAGGAT TGCTCGACAT CTATGATATC GAAATAGAAT AA
|
|---|
| Protein sequence | MKNDNNEFTE NRVFKTVSFG EDNPLHGTYE ECRFIHCNLN TTDLSDITFR NCSFESCDLS
LARLRDTGFQ DVHFLNCKLL GLNFSECRKL LLECRFESCM LKLSVFHQLD LRTTSFNDCN
LQETDFTAAD LSAAVFANCD LMRATFERTN LEKADFRSAF NYIINPENNR IRKARFRMPG
VTGLLDIYDI EIE
|
|---|
| |