Gene Paes_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1402 
Symbol 
ID6458822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1524079 
End bp1527171 
Gene Length3093 bp 
Protein Length1030 aa 
Translation table11 
GC content50% 
IMG OID642725387 
Productacriflavin resistance protein 
Protein accessionYP_002016070 
Protein GI194334210 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.335441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC TTTTTCGTTA TTTCGCTGAG CGCCATTTGC TGGCGTATAT ACTGACCATT 
CTGGTTTTTC TGTTTGGGGC GGCGACGTTG TGGCAGATCA ATCGGGCGCA GTATCCGAAG
GTTGATCTTG GTCAGATGGT TGTGACGACA CAGTATCCGG GAGCTTCTCC TGAAGATGTC
GAGCAGAATG TCACCAATAA GATAGAGGAT GAACTCAAGA GTGTCACCGA TATTAGACGG
GTTTTTTCGA TGTCGATGGA AAATGTGTCG ATTGTTATTG TCGATATCGA GCCTGATGCC
TCGGATCCTC GTGGGGTGAA ACGTGAAATC CGCGAAGCGG TTTTTCGTAT TACCGATTTC
CCGGCAGAGG TGACGGAATC TTCTCTGATC ACTGACATCA AATCGTCGAT TTTCCCTATC
CTCGAAGTCG GGCTGACCGG AGATATGCCT TACCCGGAAC TCAGGGAGTT TGCCCGGCGT
TTCGAGAAAA AGCTGAAAGA TATTCCGGGG GTTGCCAGTG TGCAGCGATA CGGATACCGT
GACCGGGAGA TTCAGGTTGA GCTGTTTCCT GATAAAATCC GGGAACTTCA GATTCCTATG
CAGGGGGTCG TTGATGCTAT TCAACAGCGA AATATCCGGG CGACGGGAGG CTCTCTCGAA
TCGTTTACAA GCGAAAAAAA CGTCGTTACG CTCGCCCAGT TCAGGAATCC TGAAGAGGTT
GGGGAGGTTG TCGTCCGTTC AAGTTTTGAC GGGCCGATCA TCAGGGTCTC CGATATTGCT
GAAGTCACGG ATGGCTTTGA GGAGGAACGG GTGTTGTCGA GAATTAACGG ACATCCGGCT
ATTTCTTTTC TTATCAATAA AAGCGAGTCT GCCGATATCA TCAGAACGGT CCAGTCTATC
AGGAAGCTGG TTGATGAAGA GGGGCAACAG CTCCCTGAGG GGATCAGATT CATATACGGG
CTTGATTTTT CCCAGTATGT GGAGAATCAA CTCTCCATTG TTGTGACCAA TGGCGCTATC
GGGCTTGTCC TTGTGCTGAT CGCCCTTACG TTTTTCCTCA ATCTTCGTAC CGCATTCTGG
GTGGCTCTCG GTATTCCTTT TACCCTGCTT GGCGGCATTT CTCTGCTTCC TCTTTTCGAT
GTCGAACTCG ATAGCGTGAC ACTGACCTCT CTGATCATTG TGATCGGTAT CGTTGTTGAC
GATGCTATCA TTATTTCAGA GAATATATTT CAGCGGCGTG AACAGGGGGA TTCGCCGGTT
GATGCAGTCG TCAACGGTGT TTTTAAGGTC TACAAGCCTG TTCTGACGAC GGTGGTGACA
ACGTTTCTGG CTTTTGCCCC CATGTTTTTC ATGCCCGGTA TTCTCGGCAA GTTTGTTTTT
GTCATTCCGC TTACGATCAG TCTTGCCCTC TTTGTCTCCA TTTTCGAGGC GTTTCTGATT
CTGCCTGCGC ATATTCTTCC CGGTTTGTAC ACACGCGATT CCGGCAATCA GAAAACGACC
ATGCGAAACT GGTTTGTCCC TCTTCGCAAT GGGTTTGAAA AACTGCTTCT TTTCCTGTTG
CGTTTACGCT ATCTCTTGAT ATTTCTGGGT TTTCTCAGCC TCGGCGGAGC GCTCTATTAC
GGACTCAATT ACATGAGCTA TATTTTGTTT CCGACCAAGG GCGCTGATGC TTTCAACATC
TGGGTTGAGT TGCCCGTAGG CAGTTCATTG AATGCAACCT CTGCCAAAGC CGCTGAATTT
GAGAAGCTGC TGGAGGTTCT GCCTGAAGAG GAGGTTTCGG CGTATCTGAC CAGAATCGGT
ACTCAGGCCG ACATTGTCCC AATGGAGAAG GAAAATTTTG TCGAGCTTTC CGTGAAGCTG
ACTCCTTATG GCACAAGAGA TCGCTCTGCA GATGAAATTG TTGCTGATAT TCGCCAAAAG
GCTATGGAGA TCGATGGTGT GCAAAAGACG ACGTTTTTTG TTGAATCGGG CGGCCCTCCG
GTTGGAAAGC CCGTCACCAT AAGGGTTGTC GGTTCAGATG ATGAGTTGAG AACAGGCCTG
GGCGATGCTG TATTCAGTTA TCTCTCAGGA ATCGAAGGAG TTACTGATCC TGATCGTGAT
GACAAGGAAG GCAAGGAGCA GATTGAAATT ACGATTCGCC ATGACAGGCT TTCACGACTT
GGGCTTTCGG TCTCTGATAT TGCCCGGACG GTCAGAACCG CGTACGATGG CCAGGTGGTG
ACCAGTGTGC GTTACGGAGA GGAGGAGGTT GATTTCAGGG TGATGCTGCA GAAATATACC
CGTCGCAACA TTGAGTATCT GGAGGAGCTT TCTATCCCGA ACCGGACGGG TCGGTTGATC
CCTCTCAAGG AAGTTGCCGG ATTTGAGCAG GGCGCGGGAC CATCGATTTT TTATCACTAT
GATGGCGAAC GCTCAATCAC TCTTTCTGCC GATGTGGCGC AGGAGAAGAT TACGCCGATC
GAGGTGATGC AGCAGGTCGA GCGGCAGTTT GCTGTGAACC GAGATTTTCC GGGGATAAAA
CTGGTGTTCG GTGGTGAGGC CCAGGAATCG CAGGAGTCAC TGAAGGGATT GTTTGTTGCC
TTCGGCATTG CGGCTGTTGG CATATATTTT CTTCTGGTAC TGCTTTTTAA CTCCCTTACG
CAGCCACTGC TTGTCATGAT GTCGATACCG TTCGCAATTA TTGGCGTTGT TATTGCTTTT
GCGCTTCATG GAGAGGTGTT CAGCTTCCTC GGTCTTCTTG GCGTTGTCGG TATGGCCGGT
GTTGTGGTCA ATGATTCTCT TGTGCTGGTG AATTATCTCA ATGAGCTCTA TCAGTCAGGA
AAAAGTACCG ATATCCCTCA GCTGGTCGCC AAGGGAACAG CCGACCGCCT TCGAGCGATT
CTGCTGACAA CGATAACGAC TGCGGCAGGA CTTCTTCCTC TTGCATACGG TATCGGAGGT
ACCGATGCTT CCATGATGCC TATGGCCCTT GCGCTGGGCT GGGGACTGCT TCTGGCTACG
CCTTTGACTC TGGTGCTGAT TCCCTGTTTG TACATGATTG GTTTTGATAT CCGTTCTTTA
TGGAAAAACA TCCGTAAGCC TCAGGCATCA TAA
 
Protein sequence
MKALFRYFAE RHLLAYILTI LVFLFGAATL WQINRAQYPK VDLGQMVVTT QYPGASPEDV 
EQNVTNKIED ELKSVTDIRR VFSMSMENVS IVIVDIEPDA SDPRGVKREI REAVFRITDF
PAEVTESSLI TDIKSSIFPI LEVGLTGDMP YPELREFARR FEKKLKDIPG VASVQRYGYR
DREIQVELFP DKIRELQIPM QGVVDAIQQR NIRATGGSLE SFTSEKNVVT LAQFRNPEEV
GEVVVRSSFD GPIIRVSDIA EVTDGFEEER VLSRINGHPA ISFLINKSES ADIIRTVQSI
RKLVDEEGQQ LPEGIRFIYG LDFSQYVENQ LSIVVTNGAI GLVLVLIALT FFLNLRTAFW
VALGIPFTLL GGISLLPLFD VELDSVTLTS LIIVIGIVVD DAIIISENIF QRREQGDSPV
DAVVNGVFKV YKPVLTTVVT TFLAFAPMFF MPGILGKFVF VIPLTISLAL FVSIFEAFLI
LPAHILPGLY TRDSGNQKTT MRNWFVPLRN GFEKLLLFLL RLRYLLIFLG FLSLGGALYY
GLNYMSYILF PTKGADAFNI WVELPVGSSL NATSAKAAEF EKLLEVLPEE EVSAYLTRIG
TQADIVPMEK ENFVELSVKL TPYGTRDRSA DEIVADIRQK AMEIDGVQKT TFFVESGGPP
VGKPVTIRVV GSDDELRTGL GDAVFSYLSG IEGVTDPDRD DKEGKEQIEI TIRHDRLSRL
GLSVSDIART VRTAYDGQVV TSVRYGEEEV DFRVMLQKYT RRNIEYLEEL SIPNRTGRLI
PLKEVAGFEQ GAGPSIFYHY DGERSITLSA DVAQEKITPI EVMQQVERQF AVNRDFPGIK
LVFGGEAQES QESLKGLFVA FGIAAVGIYF LLVLLFNSLT QPLLVMMSIP FAIIGVVIAF
ALHGEVFSFL GLLGVVGMAG VVVNDSLVLV NYLNELYQSG KSTDIPQLVA KGTADRLRAI
LLTTITTAAG LLPLAYGIGG TDASMMPMAL ALGWGLLLAT PLTLVLIPCL YMIGFDIRSL
WKNIRKPQAS