Gene Paes_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1374 
Symbol 
ID6458566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1495812 
End bp1496459 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content50% 
IMG OID642725359 
ProductDedA family protein 
Protein accessionYP_002016042 
Protein GI194334182 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0633365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAT CAGTCATAGC CTATTTACAG ACAGCCGATC CGTTAACGGT CTATCTGTTT 
CTGTTTTGCA TATCTTTTCT CGAAAATGTC ATTCCGCCGG TTCCCGGTGA TGTCCCTGTG
GCTTTTATCG GCTACATGAT TGCGTATACC GAGATCAGTT TTGCCTGGTC CGTTGCTGTG
GCTTCCCTGG GTTCCGCATT AGGTTTTATG ACCATGTTTC TCTTGAGCAG GAGTGTCGGT
CTGAGGATTT ATTCCAGAGG CGACACTCCG GTCAGGCATC GACTGGTCAG ACTGATTCAC
CGTTTTTTCC CTCCCGATGA GATGGAACAG GCCCGTCTTC GGTTTTCGAC TCACGGATAT
CTCGCCGTTC TGGTCAATCG GTTTCTTTTT GGCTCCAGGG CGGTTATTTC CATTATGGCC
GGATTTATGC ATCTCAAGGT CGCCGGCGTT TTTTTTGCCG CTCTTGCAAG TTCCGTTGTC
TGGTATGTGC TGCTGCTCTA TGGCGGATAC CTGCTTGGCA ATAACTGGGC CCAGATCGGG
ACCTATATGG CGGCATATAC CATTCCTGTT ACGTTGATCA TCGCTGGCGT CGCTATCTAT
GCAGTATTTC GATACGCCAA AAGTCGGCGG CATAAACAGG AGGTCTAA
 
Protein sequence
MLESVIAYLQ TADPLTVYLF LFCISFLENV IPPVPGDVPV AFIGYMIAYT EISFAWSVAV 
ASLGSALGFM TMFLLSRSVG LRIYSRGDTP VRHRLVRLIH RFFPPDEMEQ ARLRFSTHGY
LAVLVNRFLF GSRAVISIMA GFMHLKVAGV FFAALASSVV WYVLLLYGGY LLGNNWAQIG
TYMAAYTIPV TLIIAGVAIY AVFRYAKSRR HKQEV