Gene Paes_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1315 
Symbol 
ID6458865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1434646 
End bp1435971 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content50% 
IMG OID642725302 
Productamino acid permease-associated region 
Protein accessionYP_002015987 
Protein GI194334127 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.172576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0920117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGTG CTGGAAAAGA GGGGAAGGCC ACTATCGGGT TTTTCGGTGC TGTTGCCATT 
GGTATCGGCG GTATGGTCGG TGGAGGAATT TTTGCCGTTC TCGGTGAAGC TGTCTCTCTG
GCGCATGGCT CAACCTCTCT TGCGTTCATT ATTGCCGGAA GTGTTGCCAT TGTGACGGCA
TTCGCATACG CAAGGCTTTC GGTTGCTTTT CCCGGAAGGG GAGGAACGGT TCTTTTTATT
GACAGGGCAT TTGGAAACAA CCTTGCTTCA GGTAGTGTGA ACCTGATGCT CTGGCTGAGT
TATCTTGTTA CTATTGCTCT TTATGCCAAT GCGTTTGCTT CCTATGCTGA GACATTCTTT
CACGGTGGCG GTGGTTTACC GTTTTTGCGT CACCTTCTGA TCAGCGCAGC AATTCTTCTG
CCCACGTTTA TCAATCTGAC GAACGCTTCA TTTGTCAGCC GATCCGAAAC GGTCATTGTC
CTGTTCAAAC TGCTTCTGCT CATCGTTATT ATCGGTTTCA GCCTTCCTGC AGTCGGCGTT
GTCGCTGTTC TGCCGACGGA GTTGACTCTT CTGCCCTCTA TTGCTACTGC AGGAATGGTG
ATTTTTGTGG CCTATGAGGG CTTCGAACTG ATAGCAAATG CTTCGGATGA CGTTCGCAAT
CCGGGAAACA CGCTGCCCGC TGCTTTCTTT TCTTCAGTGG TGATTGTCAT CATGCTTTAT
GTGATTATCG GTTACGTTAC CGTCGGTGCT GTGCCGGAGA AGGAGTTGTT GCGCGCAAAG
GATTACGCTC TGGCGGTTGC GGCCAGGCCC TCTCTCGGCG AGACAGGTTT TACGATTGTT
GCGATTGCTG CGTTGCTGGC GACGTTTTCA GCAATCAATG CAACGATCTA CGGTAATGCA
CGGCTCGGAT ATTTTCTTGC GAGAGACGGC GAACTGCCGA AGGTATTCGA CAGGCAGCTC
TGGAATGAAC CGGTGACAGG AGTGCTGGTT ACTGCATGCA TAAGCCTTCT TATCGCTAAT
ACGCTTGATA TTTCTTCTAT CGCTGTTATT GCAAGCGCAA GTTTTCTGCT TGTCTTCGCC
CTCGTCAATG CGAGTGCAGC TGCACTGACA AAGGAGATCA ATGGGCGTCG CTGGATCCAT
GTTCTCGGTG CTGTCTGTTG TGGCGTGTCG CTCTCTGTTC TTCTCGTTCA CGCTGTTCTG
AGCGATTTCA GTGCTATTGT CGTTTTTCTT GTATTTATCG TTGTGTCGGT TCTCTTTGAA
TGGATCTACG GAAAAACCGC ACGTGGTCAT TTTCTCGGGC GCCCCTACGA TGCCGGAAAA
ACATGA
 
Protein sequence
MKSAGKEGKA TIGFFGAVAI GIGGMVGGGI FAVLGEAVSL AHGSTSLAFI IAGSVAIVTA 
FAYARLSVAF PGRGGTVLFI DRAFGNNLAS GSVNLMLWLS YLVTIALYAN AFASYAETFF
HGGGGLPFLR HLLISAAILL PTFINLTNAS FVSRSETVIV LFKLLLLIVI IGFSLPAVGV
VAVLPTELTL LPSIATAGMV IFVAYEGFEL IANASDDVRN PGNTLPAAFF SSVVIVIMLY
VIIGYVTVGA VPEKELLRAK DYALAVAARP SLGETGFTIV AIAALLATFS AINATIYGNA
RLGYFLARDG ELPKVFDRQL WNEPVTGVLV TACISLLIAN TLDISSIAVI ASASFLLVFA
LVNASAAALT KEINGRRWIH VLGAVCCGVS LSVLLVHAVL SDFSAIVVFL VFIVVSVLFE
WIYGKTARGH FLGRPYDAGK T