Gene Paes_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1236 
Symbol 
ID6459468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1344123 
End bp1344395 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content45% 
IMG OID642725224 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_002015909 
Protein GI194334049 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.05811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTT ACATTGGCAA TCTGGATTAC GGTGTTACAG AAGAAGATCT TCGTGAGGCC 
TTTGGCGAAT TCGGTGATGT TTCAAGCGCA AACATCATAA CTGACAAATT TACCGGCCGT
TCAAAAGGCT TCGGTTTTGT TGAAATGTCG AGCAGTGATG ACGCCAACGA AGCTATCGAA
TCTCTGAATG ACACGGATCT CAATGGTCGC ACCATCAAAG TTAACGAGGC AAAACCTCGT
GCTGAGCGCC CTGCAAGACG TTACCAGTAT TAA
 
Protein sequence
MNIYIGNLDY GVTEEDLREA FGEFGDVSSA NIITDKFTGR SKGFGFVEMS SSDDANEAIE 
SLNDTDLNGR TIKVNEAKPR AERPARRYQY