Gene Paes_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1181 
Symbol 
ID6459782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1289783 
End bp1290742 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content49% 
IMG OID642725172 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_002015857 
Protein GI194333997 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.531712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAG GTCAGGCAAA ATCAATCGTT CTCATCAAAG CAAACAAACT CCGGCTTGTC 
GACACCGCCT ATCTGGCTGA CCAGGATAAC GATGTTCTGG TTAAAACCAT CGCCACGACC
ATCACCCCCG GTCTTGACAG ACTGCTCTTG ACCAACAAAC CGGTATCACA CAGGGTTATC
AACTACCCGA TCATGCTCGG GAGCGAAATG ATCGGGCAGG TGCTTGAAAC AGGACCCGGT
GTCACCTCTG TCAGCCCCGG GGATTTCGTC TTTACCTTCA AAGGCGACCG ATGGAAGGAC
ATAGAGCCCT ATTACGGTTG CCATGCTGAA ATCGTCGCGA CATCAGAAAG CAATATTCTG
CCTCTTGGAA GGGCCCCGAT TCACCGAGAT CTTCTCATCG GCCTTCTTGG ATATATCGTC
TCGGCAATAG AAAAAGCGAG ACTTGAACCT TCCAGCCGGG TCCTGATACT CGGGCTCGGT
TCTGTTGGAC TCATGGCAGC TGAATATCTC AACAGTATCG GCATAACAAA CATCGATGCG
CTTGAAAATT TCGGCATACG GGCTCAAATT GGCAAAGTTC ACAACATCGG CATGGAGATG
ACAGACTTCA ACGAATCATT CAACGACCGT TACGATCTGA TCATCGAAAC CACGGGACGC
ATTCTTCTTA TTGAAAAGGC GATCAGAATG CTCAAACACG GACGCCAGAT ACTGCTTATG
GGCAACTATG AAGTCCTGGC CTATGATTAC CGGCTTTTGC AACATAAGGA ACCTGTTCTC
ATCTGCTCAT CTATTACCGA ATACCATCAC ATACAGAAAG CCCGCGAACT GCTCGAACAT
CCCGACATCG ACAGTGAAAA GTTTTTCACC AACGTCTTTC CTGTCGATCG CTTCGAACTT
GCCTACCGTG TCGCACTCGA CAGCAAGGAA GCGATAAAAA CCGTCATCAG CTGGGTGTAG
 
Protein sequence
MMKGQAKSIV LIKANKLRLV DTAYLADQDN DVLVKTIATT ITPGLDRLLL TNKPVSHRVI 
NYPIMLGSEM IGQVLETGPG VTSVSPGDFV FTFKGDRWKD IEPYYGCHAE IVATSESNIL
PLGRAPIHRD LLIGLLGYIV SAIEKARLEP SSRVLILGLG SVGLMAAEYL NSIGITNIDA
LENFGIRAQI GKVHNIGMEM TDFNESFNDR YDLIIETTGR ILLIEKAIRM LKHGRQILLM
GNYEVLAYDY RLLQHKEPVL ICSSITEYHH IQKARELLEH PDIDSEKFFT NVFPVDRFEL
AYRVALDSKE AIKTVISWV