Gene Paes_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1164 
Symbol 
ID6459555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1273278 
End bp1274216 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content45% 
IMG OID642725155 
Product8-oxoguanine DNA glycosylase domain protein 
Protein accessionYP_002015840 
Protein GI194333980 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.561807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACACAA TAGAAATAAT AGAAACGAAA AGACAGATTA ACCTTAAGGA AACCTTATTT 
AGCGGACAGA CATTCAGATG GGAACAACTT GAAATTGATT CGAACACCTA CATTTCAATG
ATTGGCAATA CCCATATACA GCTGCAACAA ATCAGCAACA ATAAGATCAG ATTATGCTCT
TCATCACCGC TTATAGATGG ACAAAAACCC ACAGTATTCT TCAATGAATA CTGCTCACTC
GATATCGATG AACGACTGTG TTTTTCTGAA GAATTCAGAA GAGTATATCC GGTTGTTTCT
CAACTGGCAG AACCCTATAT GGGAGTACGA GTACTGCGTC TTAATGCGTT TGAGACCCTG
ATTACATTCA TGTGCGCCCA GGCGATAGGA ATGAACCTTA TCAGAAAACA AATCCGGACA
ATCTGTAACA GATTCGGTGA AAGGCATATG ACGGAAATCG ATGGAAACCC CCTCATTCAA
TACAGTTTTC CGTCGCCTGA AACCCTTGCT GCAGCTTCGC CTCAGGATCT GAGAATCTGC
ACCAACAACA ACTGCGAAAG AGCGTCGAAT ATCATTTCCG CTGCCAGAGC CGTTGCCGAA
GGGAGACTCT GCATGGACGA ACTTATAAAC AATGAGCTGT CACTGGGATC TATCAGGAAC
TCGCTCACTG CTTACCGTGG CATAGGGCTG AAAATCGCTG ACTGCGTAAT GCTTTTCGGT
CTTCATCGTC ACGATGCATT CCCTATCGAC ACCCATGTCC GACAGTATCT GGGGAAATGG
TTTGGCCTGG AAAAAACTCA AAAAGCCCTG ACACCTAAAA CCTACATAGA ACTGCAGCAC
CAGGCCTCAG AGATCCTGAA TCCCGAAAAT GCCGGCTATG CCGGCCACAT TCTGTTCCAT
TGCTGGCGCA ATGAAGTCAG GCATATGAAC TCATTCTGA
 
Protein sequence
MNTIEIIETK RQINLKETLF SGQTFRWEQL EIDSNTYISM IGNTHIQLQQ ISNNKIRLCS 
SSPLIDGQKP TVFFNEYCSL DIDERLCFSE EFRRVYPVVS QLAEPYMGVR VLRLNAFETL
ITFMCAQAIG MNLIRKQIRT ICNRFGERHM TEIDGNPLIQ YSFPSPETLA AASPQDLRIC
TNNNCERASN IISAARAVAE GRLCMDELIN NELSLGSIRN SLTAYRGIGL KIADCVMLFG
LHRHDAFPID THVRQYLGKW FGLEKTQKAL TPKTYIELQH QASEILNPEN AGYAGHILFH
CWRNEVRHMN SF