Gene Paes_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1157 
Symbol 
ID6460225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1258543 
End bp1259298 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content50% 
IMG OID642725148 
Producthypothetical protein 
Protein accessionYP_002015833 
Protein GI194333973 
COG category 
COG ID 
TIGRFAM ID[TIGR02145] Fibrobacter succinogenes major paralogous domain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.299926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC GTAATTTTAT TCGGAATGCA GTGTCTCTGC TGTTCTGCTC AGTAGTCTTG 
TTCTCTCAGG ATGTTCTGGG TGATATTGTT TGCGATATCG AGTCCAATGT ATACCGGACG
GTGACCATCA AAGGGCAGGA GTGGATGGGT GAAAATCTCA GCGTCAAGCA CTATCGCAAC
GGCGATCCGA TACGTCATGC TGCTACTGCA GCCGAATGGG AGGCTGCCTC AAGACGTGGA
GAAGGAGCGT GGTGTTATTA CAGCAATAAT CAAAAGTACG GCAACTCCCA CGGCATTCTG
TACAACTGGT ATGCCATCAA TGATCCCCGA GGGCTTGCTC CGGAAGGTTG GCATATCCCG
GACGACAGAG AGTGGAATTC GCTTTCCAGT ATGTTAGGCG GCCGTTCGTA CGCTGGCGCT
TTTCTGAAAG CGGGTGCTAA AAACGCCCTT GATCTTTCTT CCCTCTATTC CTCATCGGCT
ACCTTTCGCG CCCTTCCTGC AGGATATCGC CGAAATGACG GGCGTTTTTA TTATATGAAT
AGCAACGCTT ATTTCTGGTC ATCGAGCCGT TTTATCGATG GATTTGCCTG GTTTCACCAT
CTGAATGCAT CGAACGATAT GGTCTTCCGT AATGATACCA GTATGGGTAA TGGCATGTCT
GTTCGTTGTG TGCGCGACAG AGGCAGCTTT ACCATGTTTG CTGATCGCCG CATTTCCCCT
TCAGCGGGAA CCGTCGGCAA TGAGTTGCCG AACTGA
 
Protein sequence
MNKRNFIRNA VSLLFCSVVL FSQDVLGDIV CDIESNVYRT VTIKGQEWMG ENLSVKHYRN 
GDPIRHAATA AEWEAASRRG EGAWCYYSNN QKYGNSHGIL YNWYAINDPR GLAPEGWHIP
DDREWNSLSS MLGGRSYAGA FLKAGAKNAL DLSSLYSSSA TFRALPAGYR RNDGRFYYMN
SNAYFWSSSR FIDGFAWFHH LNASNDMVFR NDTSMGNGMS VRCVRDRGSF TMFADRRISP
SAGTVGNELP N