Gene Paes_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1154 
Symbol 
ID6458795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1255974 
End bp1257044 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content51% 
IMG OID642725145 
Productferredoxin 
Protein accessionYP_002015830 
Protein GI194333970 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.548936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTA TTATCAATGA CAAATCCTGC ATTGCATCCA TTGGCGAGAA ATTGTCGAGA 
GTTGCGCAGG AGAATCAGTG CCATGTGGGC TATGTGTGCG GAGGTCATGG CGTATGCCAG
ACGTGCTACG TGACTGTTCT TGAGGGTGAG GATTGCCTGT CGGATCTGAG CGATATCGAA
CGGGCCTTCC TTTCAGAGAA GCAGATTGCA GGCGGAGGAA GATTGGCCTG TCAGACAACC
ATTGAAAAAG AGGGGACGAT CAGGGTGCTT TCCCGACCCG AAGAGATTCG CAGGATGCTG
TTGCAGAACC CTCTCTCCCT TTTCAGCTAT GGAGCACAGA TGGGCAAGGC CGCAGCTGAG
CGCTTCATTC CCGGTGTTTC AAACGTTATC GACCGGATTC GAAACGGGGA GATGAACAAT
CGGGAGAATC TGGGAGATCT TCTTGAAGGA ATGGGGTTTG CCATCAAGTT CGGCGCTTCG
ACCGCGGCAG ATAACATCCC TTTCAAGGAT CAGTTCAATG CTCTGCTGGA ACTGATACAG
CGTTTTGCGC CATTTTCTCT TCCTGGAACC GAGCCGGCAT CACCTTCGCT TGAGCGAGTC
AGTCTCACTG TCAGCGGTTC CGAACCTCAG CAGGTTACTA TCCCGGTCAA AGCCTCAAAA
ATCGTTGCTG TGCCATCTTC CGAACTTGAG GCTCTTGGTT TCAGAAAGGC TGATCGCATG
AACAAGGCGG GTCTGATGAC TACAGCCGAT CTTCTTGCAA AAGGTCAGTC GCCCCAAGGG
CGCAAGATGC TTGCACTTGA GCTGGAACTC GATGAGAAGG AAGTGCTGTC GATCATCAAT
TGCGCCGATC TTTGTCGGAT AGAGGGAATC GATATGAAGA TCGCCGGTCT TCTCGAAGCT
TCGGGCGTTG ATACAGTCCC CGAACTTTCG CATAGAAACC CTCATCATCT TCACTCGAAA
ATTCAGGAGG TCAACCTGAA AGAAAAAATT CTGGTATCTC TGCCATCACT CTCTGATCTC
GAAACATGGA TTGCCGAAGC TAAAAAGCTT CCCAGAGTGA TGACCTATTA A
 
Protein sequence
MNVIINDKSC IASIGEKLSR VAQENQCHVG YVCGGHGVCQ TCYVTVLEGE DCLSDLSDIE 
RAFLSEKQIA GGGRLACQTT IEKEGTIRVL SRPEEIRRML LQNPLSLFSY GAQMGKAAAE
RFIPGVSNVI DRIRNGEMNN RENLGDLLEG MGFAIKFGAS TAADNIPFKD QFNALLELIQ
RFAPFSLPGT EPASPSLERV SLTVSGSEPQ QVTIPVKASK IVAVPSSELE ALGFRKADRM
NKAGLMTTAD LLAKGQSPQG RKMLALELEL DEKEVLSIIN CADLCRIEGI DMKIAGLLEA
SGVDTVPELS HRNPHHLHSK IQEVNLKEKI LVSLPSLSDL ETWIAEAKKL PRVMTY