Gene Paes_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1126 
Symbol 
ID6460257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1232464 
End bp1232868 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content50% 
IMG OID642725120 
ProductTPR repeat-containing protein 
Protein accessionYP_002015805 
Protein GI194333945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000467816 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.192423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAG ACGCTCTGGG AAATTACAGG GGTACGCTTA GCGATGTGAA CCGTATCATC 
TTGCGCAATC AGGATAATGC GTTGGCCTGG TATGACCGGG GGAACCTGAA GCACAGTGCA
GGCGATGATG AAGGGGCGAT AGACGATTAC ACCGAAGCCC TGCGTATAGG GCTCCGAAAA
CGGGAGGAAC TTCATGCTTT GGGCAACAGG GCAATGGCAT TGGCAACGCT CGGCCGATAC
GAAGAAGCTA TAATGGATTG CACCAGCATT ATTGATGCCC TTCCAAAAAA CAAGAGCTTG
CTGAGAACCG CTCATCTCAG AAGAGCGGAA CTCAATAAGA GAACAGGCAA TGCACAAGCA
GCTCGTCTGG ATAGTCAGGC GGCTGAACAG TTAACACTAA GATAA
 
Protein sequence
MLKDALGNYR GTLSDVNRII LRNQDNALAW YDRGNLKHSA GDDEGAIDDY TEALRIGLRK 
REELHALGNR AMALATLGRY EEAIMDCTSI IDALPKNKSL LRTAHLRRAE LNKRTGNAQA
ARLDSQAAEQ LTLR