Gene Paes_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1109 
Symbol 
ID6458816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1218137 
End bp1219075 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content50% 
IMG OID642725104 
ProductABC transporter related 
Protein accessionYP_002015789 
Protein GI194333929 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.307772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC CCTCAGTTGT CATTGAACAC GTCTCTAAAA AATTTGGAGA AATCACCGCA 
TTGCAGGATG TGTCGTTTCA GGTTTTCCAC GGTGAAATTT TCGGTCTGAT CGGGGCGGAT
GGAGCAGGCA AAACCACCTT GATGAGAATT CTGACGACAC TTATCCTGCC CGACAGCGGA
CAAGCAACAA TCAATGGCAG AGATATCGTC AGTGCCTACC GTTCAATTCG AGAGCGAATA
GGTTATATGC CCGGGCGCTT CTCCCTATAC CCCGATCTCA GTGTTGAGGA AAATCTCCGG
TTTTTCGCAT CGGTTTTCTC GACAAGCATC GAAGAAAACT ATGACCTGGT CAAGGATATC
TATCAGCAGC TTGAGCCTTT CAAAAAAAGA CGTGCAGGAA AACTCTCCGG GGGTATGAAA
CAGAAACTGG CACTTTCATG CGCGCTGATC CATAAACCGG AGGTTCTTTT TCTTGATGAG
CCGACGACGG GTGTCGACGC TGTCTCCCGC ATGGAGTTCT GGCAGATGCT CAAACGCCTG
AAAGAACAGA ATATTACCAT TCTGGTGTCG ACGCCTTACA TGGATGAAGC CGGACTGTGC
GACAGGATAG GGATGATGCA GAAGGGGAAA CTGCTCGCCG TCGATACCCC GGACGAGATA
ACAGAGCTTG TGCCCATGCA ACTCTTTGCC ATACGTGTTG ATCAGATGCA TCGCCTTACC
GAAGCGCTGA GAAGCTATCC TTATAGTGCC TCGGCCTACG CATTCGGCCA GGTCGTTCAT
TACCGGGACC GAAGAAAGCA CCCGAACGAG CATGAGCTGA AAGAGTTTCT CAAAGTACAG
GGATTCAGTG CAGTCATGAT TCGCAGGATC AACCCGGGGA TTGAAGATAC CTTTATCGCG
CTTATGGAGC GGGAGGATGG AACCCATGAC AAACTCTGA
 
Protein sequence
MAEPSVVIEH VSKKFGEITA LQDVSFQVFH GEIFGLIGAD GAGKTTLMRI LTTLILPDSG 
QATINGRDIV SAYRSIRERI GYMPGRFSLY PDLSVEENLR FFASVFSTSI EENYDLVKDI
YQQLEPFKKR RAGKLSGGMK QKLALSCALI HKPEVLFLDE PTTGVDAVSR MEFWQMLKRL
KEQNITILVS TPYMDEAGLC DRIGMMQKGK LLAVDTPDEI TELVPMQLFA IRVDQMHRLT
EALRSYPYSA SAYAFGQVVH YRDRRKHPNE HELKEFLKVQ GFSAVMIRRI NPGIEDTFIA
LMEREDGTHD KL