Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1106 |
Symbol | |
ID | 6459613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1215121 |
End bp | 1216260 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642725101 |
Product | ABC-2 type transporter |
Protein accession | YP_002015786 |
Protein GI | 194333926 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.762924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACAA TTGTCTTTCT CTTACGCAAA GAGTTTCTGC AAATATTCAG GAACAAGGGT ATGCTGCCTA TCATGTTTAT CATGCCCTTC ATCCAGCTTA TCATTCTTTC CAATGCGGCA ACATTTGACG TAAAAAATGT GCAGTTCTCA CTTATTGACA AGGATCGTTC CGTATTATCA GACCTCTTTG CCGAACACGT CGGCTCATCG CCATATTTCA CGCTCACGTC AGGAAGCATG AGCGATCAAC AGGCATTCAA TGCAATTCTT GAAGGTCGTG ACAAACTCAG CATTGTCATA CCTGAAGATT TCGAAAAAGA TCTTTATCGT TACGCTCAAG CCAAAGTCCA GCTGATGATC GATGCAGAAG ACGGCTATTC CGCCGGCATT ATTCAAGCCT ACACCCGTGA AATCATCGAA TCGTTCAATG GGACAATCAT TTCTCAACGT CTCCTGGCGC CAGGAACCAG AACGTTAACG GAAAGCCCGC AGGTGGGCAA TATCCGCATT ATTTCCAGTA GCTGGTTCAA CCCGGAACTG GACTATATCG ACTTTATGGT GCCGGGCATT CTGGTTATTC TTGTCACCAT GATCGGACTG TTTCTTTCCG CGATGAACAT TGTCAGAGAA AAAGAGGCAG GAACCATAGA GCAGATCAAT GTCACTCCGG TCAAGCGCTA TCAGTTCATT ACAGGAAAAC TCCTGCCTTT CTGGATTATC GGGCTGGGTG AGCTGACTGT CGGTCTCTTT ATTGCCAGGG TGCTGTTTGA TGTTCCGATG CTCGGAAGCT ATCCACTCAT CTATGCCGTT GCCTCGATAT ATCTGCTCGT CGTTCTGGGT ATGGGGATGC TGATTTCAAC TGTCACGGAA ACCCAGCAGC AAGCCATGTT CATTGCCTGG TTCTTCATGG TCATCTTCGT TCTGATGAGT GGCCTGTTTA CGACGATAGA AAGCATGCCC GTCTGGGCTC AAAACCTGAC GCTCCTGAAC CCGGTCCGGT TCTTCGTCGA TATCATGCGG AGAATCATGC TCAAAGGATC CGGCATACAG CACATCGCCC GCGAAACAAC CGGACTTGCC GTCTACGCCG TTATTATGCT CAGCGTTGCC GTCAACCGCT ACAAAAAAAC ATCAGGCTGA
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Protein sequence | MRTIVFLLRK EFLQIFRNKG MLPIMFIMPF IQLIILSNAA TFDVKNVQFS LIDKDRSVLS DLFAEHVGSS PYFTLTSGSM SDQQAFNAIL EGRDKLSIVI PEDFEKDLYR YAQAKVQLMI DAEDGYSAGI IQAYTREIIE SFNGTIISQR LLAPGTRTLT ESPQVGNIRI ISSSWFNPEL DYIDFMVPGI LVILVTMIGL FLSAMNIVRE KEAGTIEQIN VTPVKRYQFI TGKLLPFWII GLGELTVGLF IARVLFDVPM LGSYPLIYAV ASIYLLVVLG MGMLISTVTE TQQQAMFIAW FFMVIFVLMS GLFTTIESMP VWAQNLTLLN PVRFFVDIMR RIMLKGSGIQ HIARETTGLA VYAVIMLSVA VNRYKKTSG
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