Gene Paes_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1106 
Symbol 
ID6459613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1215121 
End bp1216260 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content48% 
IMG OID642725101 
ProductABC-2 type transporter 
Protein accessionYP_002015786 
Protein GI194333926 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.762924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACAA TTGTCTTTCT CTTACGCAAA GAGTTTCTGC AAATATTCAG GAACAAGGGT 
ATGCTGCCTA TCATGTTTAT CATGCCCTTC ATCCAGCTTA TCATTCTTTC CAATGCGGCA
ACATTTGACG TAAAAAATGT GCAGTTCTCA CTTATTGACA AGGATCGTTC CGTATTATCA
GACCTCTTTG CCGAACACGT CGGCTCATCG CCATATTTCA CGCTCACGTC AGGAAGCATG
AGCGATCAAC AGGCATTCAA TGCAATTCTT GAAGGTCGTG ACAAACTCAG CATTGTCATA
CCTGAAGATT TCGAAAAAGA TCTTTATCGT TACGCTCAAG CCAAAGTCCA GCTGATGATC
GATGCAGAAG ACGGCTATTC CGCCGGCATT ATTCAAGCCT ACACCCGTGA AATCATCGAA
TCGTTCAATG GGACAATCAT TTCTCAACGT CTCCTGGCGC CAGGAACCAG AACGTTAACG
GAAAGCCCGC AGGTGGGCAA TATCCGCATT ATTTCCAGTA GCTGGTTCAA CCCGGAACTG
GACTATATCG ACTTTATGGT GCCGGGCATT CTGGTTATTC TTGTCACCAT GATCGGACTG
TTTCTTTCCG CGATGAACAT TGTCAGAGAA AAAGAGGCAG GAACCATAGA GCAGATCAAT
GTCACTCCGG TCAAGCGCTA TCAGTTCATT ACAGGAAAAC TCCTGCCTTT CTGGATTATC
GGGCTGGGTG AGCTGACTGT CGGTCTCTTT ATTGCCAGGG TGCTGTTTGA TGTTCCGATG
CTCGGAAGCT ATCCACTCAT CTATGCCGTT GCCTCGATAT ATCTGCTCGT CGTTCTGGGT
ATGGGGATGC TGATTTCAAC TGTCACGGAA ACCCAGCAGC AAGCCATGTT CATTGCCTGG
TTCTTCATGG TCATCTTCGT TCTGATGAGT GGCCTGTTTA CGACGATAGA AAGCATGCCC
GTCTGGGCTC AAAACCTGAC GCTCCTGAAC CCGGTCCGGT TCTTCGTCGA TATCATGCGG
AGAATCATGC TCAAAGGATC CGGCATACAG CACATCGCCC GCGAAACAAC CGGACTTGCC
GTCTACGCCG TTATTATGCT CAGCGTTGCC GTCAACCGCT ACAAAAAAAC ATCAGGCTGA
 
Protein sequence
MRTIVFLLRK EFLQIFRNKG MLPIMFIMPF IQLIILSNAA TFDVKNVQFS LIDKDRSVLS 
DLFAEHVGSS PYFTLTSGSM SDQQAFNAIL EGRDKLSIVI PEDFEKDLYR YAQAKVQLMI
DAEDGYSAGI IQAYTREIIE SFNGTIISQR LLAPGTRTLT ESPQVGNIRI ISSSWFNPEL
DYIDFMVPGI LVILVTMIGL FLSAMNIVRE KEAGTIEQIN VTPVKRYQFI TGKLLPFWII
GLGELTVGLF IARVLFDVPM LGSYPLIYAV ASIYLLVVLG MGMLISTVTE TQQQAMFIAW
FFMVIFVLMS GLFTTIESMP VWAQNLTLLN PVRFFVDIMR RIMLKGSGIQ HIARETTGLA
VYAVIMLSVA VNRYKKTSG