Gene Paes_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1090 
Symbol 
ID6459772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1199796 
End bp1201628 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content51% 
IMG OID642725087 
ProductATP-citrate lyase/succinyl-CoA ligase 
Protein accessionYP_002015772 
Protein GI194333912 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit
[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATTG TTATTAATAA AGAAACTCGT GCGGTAATCA TTGGCGGTGC AGCTGGTCTG 
AGTGCTGCAA AGAAAATGGC CGAGTTCGAT TTCCTTGTGA AGCGTCCTCT TACCGTGCAG
GCATTTGTCT ATCCTCCTGA AGAGGGTCAG CAGAAAGAGA TCTTTCTCGG TGGCGAACTC
AAGAACGTCA AAGTCTATTC AGCTCTTGAG AAAGCACTTG AAGAGAACCC TCAGATCAAT
ACCGCATTGA TCTATCTCGG TGCTTCCCGC GCTACGCAGG CTACCATGGA AGCACTCGAA
TCGAAAAACA TTCAGCTTGT TTCCGTTATT ACTGAAGGCG TGCCTGAAAA AGATGCCAAA
AAACTTCGCA TCGTCGCAGA GAAAAAAGGC AAAACGCTTA ATGGTCCTTC TTCTATCGGC
ATCATGTCTG CCGGCCAGTG CCGTCTTGGC GTGATCGGTG GTGAGTTTAA AAATCTTAAA
CTCTGCAACC TCTACCGTCC CGGCTCGTTT GGCGTCATTA CCAAATCCGG CGGACTGTCG
AACGAAGCGA TGTGGCTTTG CGCTCAGAAT GGTAACGGCA TTACCTCAGC CGTAGCTATC
GGCGGCGATG CCTATCCCGG CACCGACTTT GTCAATTATC TTGAAATGTT CGACAAAGAT
CCGGAAACAA AAGCGGTTGT CATGATCGGT GAAGTCGGCG GCACTCTTGA AGAAGAGGCA
GCCGAGTGGC TCGGAAAAGA ACCGCGCAGC ATTCGTCTGA TCGCAGCAAT CGGCGGAACC
TGTCAGGAAG TGCTTCCGCA GGGGATGAAA TTCGGTCATG CCGGCGCAAA AGAAGGCAAA
AAGGGAACCG GTTCAGCCCG CTCAAAAATC AATGCGCTTC GTGAAGCAGG AGCTATCGTT
CCCGATACCT TCGGTGGACT GAGCAAGGCT ATTAAACAGG TCTACGAAGA ACTTCTTGCT
GACGGCTCTA TCGCTCCCGA GCAGCCGCTC GACGATGCTC TTCTGCCGGA GCTGCCTCCG
AAAGTACAGA AGGTTATCAA AGAGGGCGAG GTGATCGTTG ATCCGCTTAT TCGCACCACG
ATCTCCGATG ACCGTGGCGA AGAGCCTCGT TACAGAGGTT ATGCCGCTTC TCAGCTCTGC
GAAAAAGGTT ATGGCATCGA AGATGTGATA GGCCTGCTCT GGAACAAGAA GCTTCCGACC
CGCGAGGAGT CAGAAATTGT CAAACGTATC ATCATGATTT CCGCGGATCA CGGTCCGGCA
GTGTCAGGTG CGTATGGCAC TATTCTTGGC GCATGTGCAG GAATTGACAT GCCGCAGGCC
GTATCGGCAG GTATGACTAT GATCGGCCCA CGTTTCGGTG GCGCGGTTAC CAATGCTGGT
AAATACTTCC AGATGGGCGT TAAGGACTTC CCGAACGACA TTCCTGGCTT TCTGGCCTGG
ATGAAGAAAA ATGTCGGTCC GGTTCCAGGT ATCGGCCATC GTGTCAAGAG CCTCAGAAAT
CCTGATCAGC GAGTCAAGTA CCTGGTCTCT TACGTCAAGA ATGAAACATC TCTTCGTACC
CCTTGCCTCG ACTTTGCTCT TGAAGTAGAA AAAGTCACAA GCGCGAAAAA GGATAACCTT
ATTCTGAATG TTGACGGAAC CATGGGTGCA ATTTTGATGG ATCTTGGTTT CCCGATTCAC
TCGCTCAATG GTTTCTTCGT GCTCGCACGG ACGATCGGCA TGATCGGCCA CTGGATTGAT
CAGAACGAGC AGAACTCGCG TCTGATCAGG CTCTACGACT ACCTCATTAA CTACGCTGTA
GAAGACGAGA GGGAAGTGCC AGAGAAGAAG TAA
 
Protein sequence
MSIVINKETR AVIIGGAAGL SAAKKMAEFD FLVKRPLTVQ AFVYPPEEGQ QKEIFLGGEL 
KNVKVYSALE KALEENPQIN TALIYLGASR ATQATMEALE SKNIQLVSVI TEGVPEKDAK
KLRIVAEKKG KTLNGPSSIG IMSAGQCRLG VIGGEFKNLK LCNLYRPGSF GVITKSGGLS
NEAMWLCAQN GNGITSAVAI GGDAYPGTDF VNYLEMFDKD PETKAVVMIG EVGGTLEEEA
AEWLGKEPRS IRLIAAIGGT CQEVLPQGMK FGHAGAKEGK KGTGSARSKI NALREAGAIV
PDTFGGLSKA IKQVYEELLA DGSIAPEQPL DDALLPELPP KVQKVIKEGE VIVDPLIRTT
ISDDRGEEPR YRGYAASQLC EKGYGIEDVI GLLWNKKLPT REESEIVKRI IMISADHGPA
VSGAYGTILG ACAGIDMPQA VSAGMTMIGP RFGGAVTNAG KYFQMGVKDF PNDIPGFLAW
MKKNVGPVPG IGHRVKSLRN PDQRVKYLVS YVKNETSLRT PCLDFALEVE KVTSAKKDNL
ILNVDGTMGA ILMDLGFPIH SLNGFFVLAR TIGMIGHWID QNEQNSRLIR LYDYLINYAV
EDEREVPEKK