Gene Paes_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1007 
Symbol 
ID6460787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1109913 
End bp1110683 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content50% 
IMG OID642725006 
Productribulose-1,5-biphosphate synthetase 
Protein accessionYP_002015693 
Protein GI194333833 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1635] Flavoprotein involved in thiazole biosynthesis 
TIGRFAM ID[TIGR00292] thiazole biosynthesis enzyme 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA AAATCTCAAA ATTTATCATC CAGAGCTTTT TCGCCAAACT TGAAGACTCT 
CTCACTGTCG ATGTCGCCAT TGTCGGTGCG GGTCCATCCG GACTGATTGC AGCAAAAGAG
CTTGCAAAAG CCGGCAAAAA AGTCGCCATT TTCGAAAGCA AGCTTGCTCC CGGCGGTGGA
GTCTGGGGCG GTGGTATGCT TTTTAACGAA ATTGTCCTAC AGGAAAACAT CATACCGATT
CTTGATGAGT ACGCCATCCG CTATAAAACA ACCGGTGAGG GCTATGTCAC GGCCGATGCC
GTTGAAGTCT CCAGTGCACT GATTTACGGC GCAGTACATG CAGGTGTACG AATTTTCAAC
GCGGTACGAG TCGAAGATCT TGCCATGCGT GACGAAAGAG TCTGCGGCGT CGTTATCAAC
TGGAATCCGG TCTCCAGACT TGAGATGCAT GTCGATCCGC TTGTCATAAC ATCACGAGCG
GTTCTTGATG GAACAGGTCA CCCGTCGGAG CTGATCAATC TTGCCAGCAA GAAGGCAGGC
ATTACTCTTG ACACCCCTAC AGGAAAAGTC ATGGGAGAAA AACCAATGTG GATGGAAAAC
GGAGAGAGTT CAACGGTCAT CAACACCAAA AGACTCTATC CCGGCCTCTA TGCCTCAGGC
ATGGCTGCAA ACAATGCCAT GGGCGGATTC AGAATGGGTC CGATTTTCGG CGGCATGTTC
CTCAGCGGCA AAAAGGTTGC CGGGCTTATT CTTGAAGACA TTCAGGGCTG A
 
Protein sequence
MEEKISKFII QSFFAKLEDS LTVDVAIVGA GPSGLIAAKE LAKAGKKVAI FESKLAPGGG 
VWGGGMLFNE IVLQENIIPI LDEYAIRYKT TGEGYVTADA VEVSSALIYG AVHAGVRIFN
AVRVEDLAMR DERVCGVVIN WNPVSRLEMH VDPLVITSRA VLDGTGHPSE LINLASKKAG
ITLDTPTGKV MGEKPMWMEN GESSTVINTK RLYPGLYASG MAANNAMGGF RMGPIFGGMF
LSGKKVAGLI LEDIQG