| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0988 |
|---|
| Symbol | |
|---|
| ID | 6460395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1085776 |
|---|
| End bp | 1087479 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642724987 |
|---|
| Product | zinc finger SWIM domain protein |
|---|
| Protein accession | YP_002015674 |
|---|
| Protein GI | 194333814 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4715] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATGT TACTGAACAA TTTTGATGAA TACATTGATG ACACTATTCT GCGTCGCGGA
TTGGCGTATT TCAGGAATGG TAAGGTAGAT GTTCCTGAAG AGTTACGTCC GGGAGTGTAT
AGCGCCATCG TTTACGGTTC GCAAGCCTAT AGCGTTCGAG TGACGGTTGC TGACGGTATT
ATTACCGAGC ATGTCTGTAG CTGTCCCTAT GATACCGCGC CAGTATGCAA ACATGTGGCT
GCTGTACTGT ATTATCTGCA GCAGGATGCT CCTGGTTTGC AGCAGAAGTC TCTGCGATCC
GGTTCTGTTG CAGCCAGAAA ACCAAAAAAG CGTCAAACAG TTGCAGAGCG AGTGGATGGC
GTCCTTCATC ATGTTGATTT TGATGATCTT AAACAGTTTG TCCGGGAACA GGCGAACCTG
AATATCGAGT TCAGGAACCT GCTTTTTGCA TCGTTTGCCA GTCAAGGCTC AGGTGAGTCA
AAAGGGTTTT ATCAGAAGCA GTTGAAGTCG ATCCTCAGGA GTGCCAAAGA CCGGAATGGC
TTTATAGGCT GGTCTGCATC GAACCGCGTA GCTGAAGGAG TCAATCAGTT TTTGAAATTG
GCGAAACAGC AACGTGACGC CAGGAATGAC AAGGGCTGTA TAGTTATCAG CGCTGCAGTT
ATGGAGCAGA TGGTCGATGC ACTTCAATAT GCCGATGACA GCGATGGTTC TATAGGGGGG
ATTATCAATG CAGCTTATGA ATTGCTGTAT TCAATAGCAG AATCTCAGCC TGAGGAAAAT
ATCAGAAAGC AGCTTTTTGA TTACTGCTTT AAGGCAGTCG AGAAGAAAAT CTATGCTGGT
TGGGATTGGC ATACAGGCAT GTTGCGTATT GCAGCAATGC TTGGCAATAC TCCAGAGGAG
ATCAAGCGCG TTTTTTCTGA ACTTGACAAT GAAAATGGAA CAGGCTATTC CATGCAGGAG
GCTCAACGTA TTACGTACGG CCTTATTGCG AGAGTGAAAG GCGAGAATGC TGCCGGTGAG
TACCTTGAAG CCAATCAGGA TAATCCGGAA TTGCGGAGGA TTGCTATCCA GAAAGCATTG
ACGATGGGTG ATTATCAGAG AGCCATCCTG ATTGCAAAGG ACGGCGTGAC TTATGACAGG
CAAGAACGTC CCGGGCTGGT GATTGAATGG TACGATTGGC TGCTCAAGAT CGCGCTGCTT
CAGGATAACA GGGAGCATAT CATGCAATAT GCCCGAATCC TTTTTATTGA GAATTTCAGT
CAAGAGCAGG ATTATTATTC AATTCTGAAA CAATACGTGG CACCGGAGAT GTGGGTCGGG
TATGTGAACG ATCTTATTAA GGAGATCGCT GAAAAAAACA GACGGTGGAA TGCAGAGGAG
CAGATTGCAG GTATTTGCAT ACTTGAAGGT TGGATGGATA TGCTCCTGCA AGTCGTGAGC
GAGTCGGAGA GCCTGCATAC AATTGCGAAA TATGAGCCGA ACCTTGCAAA GGATTACGCT
TCCGAACTGG TTGGCTTGTA TAGCCGTGGT GTGAGAGAGT ACCTGCAGCA CCATGTCGGG
AGAAATCATT ACCAGTATGC CTGCAGGTTT TTGCGGAGAA TGATCAAGCT CGGGGGAAGG
GCTGCGGCAG ACGAGCTTGT ATCCTTCTTA AGGACAGCGT ATCCTCACCG AAAAGCACTC
ATTGATGAAC TCAATAAGGT ATGA
|
|---|
| Protein sequence | MDMLLNNFDE YIDDTILRRG LAYFRNGKVD VPEELRPGVY SAIVYGSQAY SVRVTVADGI
ITEHVCSCPY DTAPVCKHVA AVLYYLQQDA PGLQQKSLRS GSVAARKPKK RQTVAERVDG
VLHHVDFDDL KQFVREQANL NIEFRNLLFA SFASQGSGES KGFYQKQLKS ILRSAKDRNG
FIGWSASNRV AEGVNQFLKL AKQQRDARND KGCIVISAAV MEQMVDALQY ADDSDGSIGG
IINAAYELLY SIAESQPEEN IRKQLFDYCF KAVEKKIYAG WDWHTGMLRI AAMLGNTPEE
IKRVFSELDN ENGTGYSMQE AQRITYGLIA RVKGENAAGE YLEANQDNPE LRRIAIQKAL
TMGDYQRAIL IAKDGVTYDR QERPGLVIEW YDWLLKIALL QDNREHIMQY ARILFIENFS
QEQDYYSILK QYVAPEMWVG YVNDLIKEIA EKNRRWNAEE QIAGICILEG WMDMLLQVVS
ESESLHTIAK YEPNLAKDYA SELVGLYSRG VREYLQHHVG RNHYQYACRF LRRMIKLGGR
AAADELVSFL RTAYPHRKAL IDELNKV
|
|---|
| |