Gene Paes_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0930 
Symbol 
ID6460738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1023437 
End bp1026172 
Gene Length2736 bp 
Protein Length911 aa 
Translation table11 
GC content49% 
IMG OID642724933 
Producthypothetical protein 
Protein accessionYP_002015620 
Protein GI194333760 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2982] Uncharacterized protein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.910887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGT TGATCAAGTT TTTTTTACTG ACCGTGGTTC TCTTGTTTGC AGGCCTTATG 
GTTTTTCTGC AGATCATCAA GCCGCGCATC AGTGATACGA TTAAATCTGT TCTTAACGAG
CGGCTCAATG CGCAAATCGA TTATTCAGAC GCCGGGATTT CATTGTTTCA GTCGTTTCCG
CGCATTACCG TGACGCTTCA TGATCTTCTT GTAGAATCTC AGCCAGCCGA TAGTGCCGTT
GCCGATACTC TCGGATCATT TGAACGTTTT TCAGTCTCAT TCAATCCTTT TTCACTCTTT
CAGGGCCGCT TCGATGTCTA CGCCCTTCGT TTCGACAAGC CGCAGATTGT CATCGAAAAT
GATGAGACAG GGCATCTGAA CTGGGATATT TTCCCCTCTA CAGATGCTGA CGAAGAGGCT
TCATCAGCGT CAAGACCGTT TTCCCTCAAC CTTCATGATT TCAGAGTCGT CGATGCAACG
GTGATCTATC GTGACCGGAA GGGATCGGCA GCCCTTGAAC TTGGTGGATG GAATAATCAA
CTCAAGGGTC GTTTCAGTGG AGAATCATCG GTTATTCATA TGGTCAACAC CGTTAATGAG
CTTACTCTGG CAGCCGGAGG GGTAACCTCG ATAGATCATG CAGCGGTTTC TCTCAATGCC
GATATCGATG CTGATTTTAT AAACAAAAAG TTTACGCTGC GTAAAAACCG TCTGACCCTC
AATGAACTCG GAGTTGTTCT GGATGGAACA GTCTCTCTGA TGGATGACGG CTTGAATACC
GATCTGGACT TCAAGGCCGA TGATATCACC CTCAAAAATC TTCTTTCGTT AGTTCCTGCT
CTCTATACCC ATAACTTCAA TCGTCTTGAC GCAGAGGGCC GCGTTGCTAT GAGCGGGCAT
GTGAAGGGCC TCATGAGAGA TGGCCAGGTT CCCGCATTTA AACTCGCCGT CGATGTCTCT
GACGGTAGTT TCGGTTATGA CGGTGTTGCT GTGCGGGCAA ACAATATCGA TTTTAGCGGT
GATATCCGTA ATCCCGGAGG AGATATTGAC AGCACCGTCA TTGCGGTGCC TGATGTCAAG
CTGTTGATCG GTAAAGAGCC TTTTGCATTC GGCTTTTCCG TCCGTCATCC TTTTTCCGAT
CCGTCGATCG ATGCCTCGCT CAACGGGCGT ATCGTTCTGG CAGATCTTCA GAAAGTTTAT
CCTGTTGAAA ATGTTGAATT TTCAGGTGAA TTGCTGACAA ATGTTTCTGT AAAGGGGCGC
CTTTCTGATT TTTCATCGGG TTCATTTGCT GCAACGAGGG CTTATGGTTC GTTTGTGGCT
ACTGATATGC GGTTTTCTTC CGCTCTGTTT CGGCCTGATC TGATTATTTC CAAAGCACAG
CTTAACCTCT CCCCCCGATC GCTGGACCTG GTGGAGTTCC GTGCGGTTGC CGGCAAAAGC
GATTTTGCCG CAACAGGCCG CTTTGATGAC TATATGCCTT ATCTCTTCAG GAAAGGAGTG
TTGAAGGGGA AAATTTCCCT GAAGTCAGAT ACCATTGTTC TTGATGAGTT CGAGAATCTC
GAGGAGGAAA AAAAACCTCT CCTGCTTCCA GCCGGGATTG TTGTTGATAT TGATGGGCGG
TTCGACCGGG TTTTGTTTGG TGATATGGAG TTCACGGACG CCAGTGGGGG CCTGACGCTG
AAAGATGAAA CGCTTTCATT TACCAACGTG AAAGCCAGTT CACTGGGGGG TACGGTGACG
CTCAAGGGTT ACTATAGCAC GAAAGGTGGA AAAGCCGATA CCGAATTCAG TGCAGAGGCG
GCCGAGGTCA ATATTGTCGA GTCCTACAAG TCGGTGAGCC TGCTTAAAAC CCTTGCTCCG
GTTGCAGAAT ATGCGACAGG GGACGTCAGT GCCAACCTCG ACCTGCGTAT GGCGCTTGAT
GAGGCGTTTA ATCCTCTGCT TGAAACGCTT AACGGTAGCG GCAGGATAAC AACCAGGGGA
TTGCATATTG AGCAATTTCC TCCTGTGAGC CAGTTGGGGC TGCTGCTTGA TGTGGCTCTT
CTTGATACGA TCGATATACC GGACGCAACC CTCGATTTTG CTGTCGAGGA CGGCAGGGTG
ACGACAAAGC CGTTTTCGTT TTTTGTCAAC GATATCGCTA TAAGGGCGGG AGGAGTAACC
GGTTTCGACA AAACTCTTGA CTGGACGATG GAGCTGCGCA TACCCAAAAA ATATATAGGG
GCATCGGGTC AGAAAAACAT TACCTCTCTT TTGCAGAAAC TGCCGATGCA GGGCATGAAG
CTCGATCTGC CTGATACGGT TCTGGTCGAT GCTTCTCTGA AGGGTTCGGT ATTGAAGCCC
CAGATCGGTC TTGATGTCAA AAAGACCGCT ACGAGAATTC TGGAGGGGGT CAAGCAGGAT
GTCCAAAAGA AAATTACCGA CGAGTTGCGC GGTCGTCTCT TGCCTGGAGG CGCTGATTCT
TCTCAGTCTG CGGCTTCTGA ATCCCCTGCC CGGATGCTCA AAGAGTCATT GAAAAAGGTT
CTTCCCGGAG ATGCTTCCGG AACGGATGCC GGAAATGAAG AAAAGGCAGA GGCTGATACC
GCTGCAGCAA AACCGCTGCT GCCGGGTCTT CTGAAAAGCA TTTTCACACC CGCTAAAGGG
GGTGCTCCTT CCGGGAAAAG TGTTCCTGAC TCTTCGGGTC TTCAACAGGA GGATGGAGCC
TCTTCCGATA GTGCTTCCAC TAAAGAAGGG CAGTGA
 
Protein sequence
MNKLIKFFLL TVVLLFAGLM VFLQIIKPRI SDTIKSVLNE RLNAQIDYSD AGISLFQSFP 
RITVTLHDLL VESQPADSAV ADTLGSFERF SVSFNPFSLF QGRFDVYALR FDKPQIVIEN
DETGHLNWDI FPSTDADEEA SSASRPFSLN LHDFRVVDAT VIYRDRKGSA ALELGGWNNQ
LKGRFSGESS VIHMVNTVNE LTLAAGGVTS IDHAAVSLNA DIDADFINKK FTLRKNRLTL
NELGVVLDGT VSLMDDGLNT DLDFKADDIT LKNLLSLVPA LYTHNFNRLD AEGRVAMSGH
VKGLMRDGQV PAFKLAVDVS DGSFGYDGVA VRANNIDFSG DIRNPGGDID STVIAVPDVK
LLIGKEPFAF GFSVRHPFSD PSIDASLNGR IVLADLQKVY PVENVEFSGE LLTNVSVKGR
LSDFSSGSFA ATRAYGSFVA TDMRFSSALF RPDLIISKAQ LNLSPRSLDL VEFRAVAGKS
DFAATGRFDD YMPYLFRKGV LKGKISLKSD TIVLDEFENL EEEKKPLLLP AGIVVDIDGR
FDRVLFGDME FTDASGGLTL KDETLSFTNV KASSLGGTVT LKGYYSTKGG KADTEFSAEA
AEVNIVESYK SVSLLKTLAP VAEYATGDVS ANLDLRMALD EAFNPLLETL NGSGRITTRG
LHIEQFPPVS QLGLLLDVAL LDTIDIPDAT LDFAVEDGRV TTKPFSFFVN DIAIRAGGVT
GFDKTLDWTM ELRIPKKYIG ASGQKNITSL LQKLPMQGMK LDLPDTVLVD ASLKGSVLKP
QIGLDVKKTA TRILEGVKQD VQKKITDELR GRLLPGGADS SQSAASESPA RMLKESLKKV
LPGDASGTDA GNEEKAEADT AAAKPLLPGL LKSIFTPAKG GAPSGKSVPD SSGLQQEDGA
SSDSASTKEG Q