| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0888 |
|---|
| Symbol | |
|---|
| ID | 6459139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 973972 |
|---|
| End bp | 975453 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642724891 |
|---|
| Product | F0F1 ATP synthase subunit beta |
|---|
| Protein accession | YP_002015578 |
|---|
| Protein GI | 194333718 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit
[TIGR03305] alternate F1F0 ATPase, F1 subunit beta |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.20194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.19048 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA GGATTATGAG GCATCATTCA GATTTTCCTT GGAAAGGAGC TGTTGTTTCT
GTAAGGGGAA GCGTCGTCGA TATCCGGTTC GATGATCATC TTCCCCCGAT TTATTCCATG
CTGCAGACCG GCAGGAATGG TGAGGTGCAC ATTGAGGTCC TTTCCCAGCT TGATTCGCGG
CATGTACGCG CTATTGCGCT GACTGGCACA GAAGGCCTGT CTCGCAGTAT GACTGCGCTC
TACAACGGAA GTCAGTTGCA AGCGCCAGTT GGTCCGGCTA TTCTTTCAAG GATGTTCGAT
GTGTTCGGCA ATCCCATAGA TCGGGGTGAA CCGCCGGAAG GTGTTCAGTG GCGTCCGGTG
CATCGCAATC CTCCTTCTTT ATCAAGACGT TCAACGCATT CCGAGGTTTT CCAGACCGGG
ATCAAGATTA TCGACCTTCT TACACCGCTT GAACGCGGCG GTAAATCCGG GCTCTTCGGC
GGGGCCGGTG TCGGTAAAAC TGTTCTCCTG ACTGAGATGA TTCATAACAT GGTCAGCCAT
CACAGGGGTG TAAGCATTTT CTGCGGGATA GGCGAACGAT GCAGGGAAGG TGAGGAACTC
TACCGTGAAA TGAAAGCCGC CGGAGTACTT GACAATATGG TGATGGTGTT CGGTCAGATG
AACGAGCCTC CCGGAAGCCG TTTCAGGGTA GGCCATGCGG CGCTGACAAT GGCTGAATAT
TTCAGGGATG ATGAGCACAG GGATGTTCTT CTTCTTATCG ACAATATTTT CCGTTTTATC
CAGGCCGGCT CGGAGATCTC AGGTATGATG GGCCAGATGC CCTCACGGCT TGGTTATCAG
CCGACGATGG GAACGGAACT TTCGAAGCTT GAAGAGCGTA TCGCCAATAC AGGAACAGGA
TCGATAACCT CAATTCAGGC GGTCTATGTG CCTGCCGATG ATTTTACCGA TCCGGCTGCT
GTTCATACCT TCTCGCACCT CTCTTCATCA ATCGTTCTGT CACGAAAGCG TGCCGGTGAA
GGATTGTTTC CTGCTGTCGA TCCCCTGCAA TCTGTTTCGA AAATGGCCAG CCCTACAGGG
ATTGGTCATC GTCATTACAA CCTTTCGCGC GATATCAGAA AGGTGCTTGC GCAATACAAT
GAACTGAAGG ATATCATCGC TATGCTCGGC CTTGAGCAGC TTTCGACGCA GGACCGGGCC
GTTGTTGCCC GGGCACGGAG AGTAGAGCGG TTTTTTACCC AGCCGTTTTT TTCGACTGAG
CAGTTTAGTG GAATCAAGGG GAAGCTGGTT TCGCTTGATG AGGTAATCGA TGGTTGTGAG
CGGATTTTGC GAGATGAGTT CATGGAGTAT CCTGAAAGCG CATTGTATAT GATCGGCAGC
ATTGACGAGG CTAAAGAGCG GATGAAGGTT TCCGGACCTG CCGGGGAGCC CGCTGTTGTT
CCAGGAGTTC GAGAAAAAGG AGGAGGGGAT GATGAGCAGT GA
|
|---|
| Protein sequence | MSDRIMRHHS DFPWKGAVVS VRGSVVDIRF DDHLPPIYSM LQTGRNGEVH IEVLSQLDSR
HVRAIALTGT EGLSRSMTAL YNGSQLQAPV GPAILSRMFD VFGNPIDRGE PPEGVQWRPV
HRNPPSLSRR STHSEVFQTG IKIIDLLTPL ERGGKSGLFG GAGVGKTVLL TEMIHNMVSH
HRGVSIFCGI GERCREGEEL YREMKAAGVL DNMVMVFGQM NEPPGSRFRV GHAALTMAEY
FRDDEHRDVL LLIDNIFRFI QAGSEISGMM GQMPSRLGYQ PTMGTELSKL EERIANTGTG
SITSIQAVYV PADDFTDPAA VHTFSHLSSS IVLSRKRAGE GLFPAVDPLQ SVSKMASPTG
IGHRHYNLSR DIRKVLAQYN ELKDIIAMLG LEQLSTQDRA VVARARRVER FFTQPFFSTE
QFSGIKGKLV SLDEVIDGCE RILRDEFMEY PESALYMIGS IDEAKERMKV SGPAGEPAVV
PGVREKGGGD DEQ
|
|---|
| |