Gene Paes_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0794 
Symbol 
ID6460111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp871628 
End bp872293 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content48% 
IMG OID642724790 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002015487 
Protein GI194333627 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ACGCCAGCAG CGAACACACA AAAAACGCTC TTGTCAACGC AGCAGGAGAG 
CTCGCCGCAG AAATGGGATT TTCAAATATT TCAACACGAG CAATTGCCGA ACGCGCCGGA
GAAAATATCG GGAGCATTCA TTACCACTTC GGAGGAAAGG ACAAACTTTT TGAAGCGGTC
ATCCGTGAAG TTATTGCCAG GGGAAATAAC TTCAGCGTTG CTGATGCGAT CGCCCCTTTC
AGCGACAGCC TGAACACTCG TGAAGGACAG CTGAAAGCGT TACGTGCTGT TGTCAACAAA
AAGATATCCA GCCTGTTTGA TCCCTCTTTC CCCCGCTGGC ACAGCAGGAT CGTCTACCAG
CTGATGCAGT ATACATGCCC TCTTCAGGAG ATTCTTCAGA AAGAGCTGCT CAACCCTATG
GTTGAGAGTA TATCCGAGCT GCTGAGCGCT ATCAATCCCT TTCTGGAACG GGATGAAACA
ATGCTGATCA CCTTTCTGAT GATCTCACCT ATCGTCTCGC ATGCCGATTA TATGCCCTTT
TGTCTCGACC ATCTTGGAGA GGATCATTAC AACGACGACT ACCTCCGTAA AATGGAAGAT
TTCATCGTCA AGCAGACTGA GCGACTCCTT GGTATAGGAA ACAATCCATC TCAATCTCAA
CAGTAG
 
Protein sequence
MKKYASSEHT KNALVNAAGE LAAEMGFSNI STRAIAERAG ENIGSIHYHF GGKDKLFEAV 
IREVIARGNN FSVADAIAPF SDSLNTREGQ LKALRAVVNK KISSLFDPSF PRWHSRIVYQ
LMQYTCPLQE ILQKELLNPM VESISELLSA INPFLERDET MLITFLMISP IVSHADYMPF
CLDHLGEDHY NDDYLRKMED FIVKQTERLL GIGNNPSQSQ Q