Gene Paes_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0674 
Symbol 
ID6458521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp716342 
End bp719062 
Gene Length2721 bp 
Protein Length906 aa 
Translation table11 
GC content48% 
IMG OID642724667 
Producthypothetical protein 
Protein accessionYP_002015368 
Protein GI194333508 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.62108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00476533 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCCGA CGGCCATGGT GATCATGCAT CTTTATCGTC TATCCCGCCA TATACTTGTC 
GGAATCATCG TTCTGTCTGT CTTTTTTGTC TCTTTTTCTC CTTGCCTGGC AGAAGATGAG
CTTTCTTCAC ATGGTGGAAC TGAATCCCGG GGAACGGTTT CTGCAGATTC TTCTTTGGTA
AGCGGAACGC AATCGACAAT TGTTTTTTCG GCCAGAGATT CGCTTCGTTA CGCTATCTCT
CTTCGTACCA TGGATTTGTG GGGAAAGGCG TCGATAGCAT CTGATAACAT GTCGATCGAT
GCTCCCCGGA TCGTCGTTGA TTACAGTACT TCATCGCTCA ATGCTTATCC GTCGAAGGAT
GATAAAGGGG ATTTGGTTGA AAAACCTGTT TTTGCCGATA AAAAAGGAAG CTTTGAGGCT
GAGGAGATTA CCTATAATTT TTCGACCCGT GAGGGTTTGA CCGAAAACAT CTCATCGGAG
ACCGATGAGG GCTATTATAG CGGAGAAGAG GTGACCAGGC TTGAAAACGG GGAGTTGCTT
GTCAAAAACG GTTTTTTTAC GACCTGCCCT AAAGATGATC CGGATTTCTG GTTTTACAGT
CGGGATATGA GAATTATCCC CAATGACAGG ATTGTAGCGC GTCCGTTGAT CATGTATATC
CATCCTGTGC TCTTTTCGCA GCAGCTTCCG CCGATTCCTC TTCTTGCACT TCCCTACATG
GTCATTCCAC TGAGAACCGA CCGTTCTTCA GGATTTCTGA TACCCAGAGC AGGTAATGAC
GATGATCGCG GGTTTTATCT GTCGAATCTG GGGTATTTCT GGGCGTTTAA CGATTACACC
GATCTGCGCC TTGAGGGTGA TCTTGCTTTG AACGGTAGCT GGCGTATCGG TGAGAGGTTC
CGCTATAATA AACGCTATTT GTATCATGGA ACTCTTGAGG CGGAATTCGA ACGCTATCTC
AATGATTCGG ATGAAAGCAA ATATGATAAC TGGTTTGTTA ATCTGGAGCA TCATCAGAAG
TTCGATCCGA CAGCCAGACT TGACCTTGAT CTCGAATATC AGGGGGGCAA CAGGTACTAT
GATGTCAATT CCATTGATTC GGAGAACATC ATTACAGAGC AGGCCAGTTC ATACGCATCA
TTTTCCAAGA CCTACAATGA GGGGCGGCAG GGTTTTACCC TGAGTTACCA GGGGGTGCAG
GATCTTACAA GTGATGATGT TACACAAACA TTGAGTGCAG CATATTTTCA GAGCAGAGTC
TACCCGTTCA GTTCCGGCAG CAACAGCCCG GATGACTGGA GATCCAGATT TTCGCTGATT
CCTCGTGCTG ATGCAACCAT CTATTCGGCT GTGATCGATG AGGACGATTA TTGGAACTAT
CGTGGAGATG TGGGGCTTGA GATGGCGTAT CTGCAGGACT TTTCCGAGGG GTTTTCGGCC
CGGTTTACGC AGGGGATCCA TTTTCAGGGG CAGTTCGACG ATAGCCCGCT CTACGGGATC
CGGCGAGGAG CGAAGCTTGA ACTTCCTTTA GGGGTGCAAT CAAGGCTGTT TCGGTATCTT
AACCTGAACG CGAGTATACT TTTCAATAAC TACTATCAGG ATGGGGTGGT CACGGCAACA
TACGATGATG GTGATGTTGT GACCTCTACA ACCGATGAGC GGTCGCATTT TTCCAGCTAT
GGCGTTGAAC TCGAAGCTGA AACAAGGCTG TATGGAACCC TTTATTCCGG TCTGTTGAGA
GATCTGGCAG GAATAAAGGC GCTTCGTCAT ACCCTGATCC CGACGCTGAG TTTTACATGG
AATCCTGATT TTACGAGTGA CGATTTTGGC TATTACGGTC GTTATTATGA TGAATCAGAG
GGAGCGTATG TCCGATACAA CAGATTTATG GATGCGCTCT ACAGCGAGGT TCCCGGACCT
AACTGCACGG TAGGGCTGGG TCTTCAGAAC CTTTTTCAGG CAAAGATGGC AGGCGACCCC
AAAAAATCAA GCGACAGGGT TGTGCAGCTA TTGTCATTTG ATGCTTCAAC GGCATACAAT
TTCGCGGCTG ATTCTCTGAA ACTGGCCCCT CTCGTTCTTT CTGCTTCCAG TAATGCTCTG
AGCCCTAATC TGCTTTTCAG CGCGGGAGCT GTCTATGATT TTTACAGCTA TGATGCTGTG
AGCGGCGACA GGATCAATAC CTTCTACGCG GATGATGGGG GCGGTTTGCT GCGCTTTGTC
AAAGGGTTTA TGAATATGAG CCTGAATGTT AACGGCTACT TTCGTTCCGG CAATCAGGGG
TCAGCGCCGA CTGAGATCCT CAATGCCGTA GAGGGCGACA ATGCTCTTGC AACGTCGGTT
TACAAGGAGC GGTTTCGAAA AAAATCGCAT TTGCAGGAGG CCTATCGCCT GCCGTGGCAA
CTGCGTCTGT CACTGTACCT GAACTCGGAT CATGAAAATC CGCTTGAGCC TGCCGACACC
GATGCGCTGC TCAATACCTC TGCCCGTATA GGTTTGAGCA ATATCTGGCA GTTGGGTGTC
AATACCGGCT ATGATATCGA AAATGGTGAT TTTGTCTTTC CCCAGATAAA CCTCTATGGC
GATTTCAACT GCTGGGAAAT GGGCTTTGAG TGGATACCTT CCGGCGAGTA CCAGAGTTAC
TTTTTTCAGA TCGGCATCAA ATCTCCTCAG CTGAAAGATC TTCGTTTCCG TCAGCGCGGC
AGGATCGACA CCTCCTCCTG A
 
Protein sequence
MKPTAMVIMH LYRLSRHILV GIIVLSVFFV SFSPCLAEDE LSSHGGTESR GTVSADSSLV 
SGTQSTIVFS ARDSLRYAIS LRTMDLWGKA SIASDNMSID APRIVVDYST SSLNAYPSKD
DKGDLVEKPV FADKKGSFEA EEITYNFSTR EGLTENISSE TDEGYYSGEE VTRLENGELL
VKNGFFTTCP KDDPDFWFYS RDMRIIPNDR IVARPLIMYI HPVLFSQQLP PIPLLALPYM
VIPLRTDRSS GFLIPRAGND DDRGFYLSNL GYFWAFNDYT DLRLEGDLAL NGSWRIGERF
RYNKRYLYHG TLEAEFERYL NDSDESKYDN WFVNLEHHQK FDPTARLDLD LEYQGGNRYY
DVNSIDSENI ITEQASSYAS FSKTYNEGRQ GFTLSYQGVQ DLTSDDVTQT LSAAYFQSRV
YPFSSGSNSP DDWRSRFSLI PRADATIYSA VIDEDDYWNY RGDVGLEMAY LQDFSEGFSA
RFTQGIHFQG QFDDSPLYGI RRGAKLELPL GVQSRLFRYL NLNASILFNN YYQDGVVTAT
YDDGDVVTST TDERSHFSSY GVELEAETRL YGTLYSGLLR DLAGIKALRH TLIPTLSFTW
NPDFTSDDFG YYGRYYDESE GAYVRYNRFM DALYSEVPGP NCTVGLGLQN LFQAKMAGDP
KKSSDRVVQL LSFDASTAYN FAADSLKLAP LVLSASSNAL SPNLLFSAGA VYDFYSYDAV
SGDRINTFYA DDGGGLLRFV KGFMNMSLNV NGYFRSGNQG SAPTEILNAV EGDNALATSV
YKERFRKKSH LQEAYRLPWQ LRLSLYLNSD HENPLEPADT DALLNTSARI GLSNIWQLGV
NTGYDIENGD FVFPQINLYG DFNCWEMGFE WIPSGEYQSY FFQIGIKSPQ LKDLRFRQRG
RIDTSS