| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0598 |
|---|
| Symbol | |
|---|
| ID | 6460302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 636006 |
|---|
| End bp | 637433 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642724597 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_002015301 |
|---|
| Protein GI | 194333441 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACAA ATCTCGCAGA AAAGTATAGC AACCCCGGTC CAAGGTATAC GAGTTATCCG
ACGATTCCTT CATGGAGTGC AGACGGTGTG ACGCAGCAAC AGTGGAAAGA GGCTATGGTT
AAAGGTTTTA ATGACAGCAA TGACACGACA GGTGTCAGCA TGTACATTCA TATTCCTTAC
TGTGAGAATT ATTGCTATTT CTGCGGGTGC AACGCCCATC GTACTCAGGA CCATTCCTAC
GAAGAGCCCT ATCTTCAGGC CTTGCTCAAG GAGTGGCAGA TGTATCTCGA TGTCTTTCCC
GGGACACTCA ATGTCAAGGA AATGCATATC GGCGGTGGTA CACCGACCTT TTTCAGCCCG
GAAAACCTTA TCAGACTTGT TAACGGGTTG TATGAGCATG TCAATCGTGT TGACGGGTAT
ATGTTCAGTT TTGAAACCAA TCCCCGTTCG ACGACCAAAG AGCACCTCGA AGCGCTCTAC
AGCGTTGGCT TTCGCCGCAT GAGTTTCGGC ATTCAGGATT TCGATCCTGT TGTTCAGAAA
GAGATCAACC GTATGCAGTC CTTTGAGCTG GTTAAGGAGA AAGTCGATCT TGCCCGTGAA
ATCGGTTTTA CGTCAATTAA CTTCGATCTC GTTTACGGCC TGCCGAAGCA GACCCTGGCT
ACTATTACTG ATACCATTGC CAAGGTAATG GAGCTGAGAC CCGATCGCCT TGCTTTCTAT
GCCTATGGTC ACAACCCTCA TATGTACGAA GGTCAGAGGA AGTTCAAGGA GGAAGACCTT
CCAGTAGGCG CAGTCAAGCA GGAGCTTTAT GATAAAGGGC TCGAAATGCT TGAATCCATC
GGTTATCATG AAATCGGCAT GGACCACTTC GCTCTTGAGG GCGATACGCT CTACGAAGCA
GCCAAAACCG GTTCACTGCA CAGAAACTTC ATGGGTTATA CTGAAAATAC CACCCAGATG
ATGCTGGCTC TCGGCTCTTC ATCCATCAGT GATACCTGGT ATGCCTTTGC TCAGAACGAA
CGTAGCGATA AGAAATATAT CGAGGTAGTC AACCAAGGCC GTTTCCCGCT CCTCAGAGGC
CATCTGCTGA CTGATGAAGA TCTCGTTCTG CGTCGTCATA TTCTCAATCT TATGTGCCGC
CAGGAGACCT CATGGGCTGA TCCGAAAGAC TATACCGATG AGCTTGACGT GGCGAAATTC
CGCCTTGAGG ATATGCAGAA CGACGGTATG GTTGTTCTCT CTGAAAATGG GGTGCGCGTG
ACTGAAATCG GTATTCCTTT TCTGAGAAAT ATCTGTATGG CGTTCGATGC GCGTCTCTGG
CGTTCAGACA GCCTTTCCAA GGCATACAAT GTTTCGCGCG ATATCCAGAA GACCTATATT
GAAAAAGCCC GCCAGGCAAA GCTGGCCAAG GAAAATCATC CGGGATAA
|
|---|
| Protein sequence | MGTNLAEKYS NPGPRYTSYP TIPSWSADGV TQQQWKEAMV KGFNDSNDTT GVSMYIHIPY
CENYCYFCGC NAHRTQDHSY EEPYLQALLK EWQMYLDVFP GTLNVKEMHI GGGTPTFFSP
ENLIRLVNGL YEHVNRVDGY MFSFETNPRS TTKEHLEALY SVGFRRMSFG IQDFDPVVQK
EINRMQSFEL VKEKVDLARE IGFTSINFDL VYGLPKQTLA TITDTIAKVM ELRPDRLAFY
AYGHNPHMYE GQRKFKEEDL PVGAVKQELY DKGLEMLESI GYHEIGMDHF ALEGDTLYEA
AKTGSLHRNF MGYTENTTQM MLALGSSSIS DTWYAFAQNE RSDKKYIEVV NQGRFPLLRG
HLLTDEDLVL RRHILNLMCR QETSWADPKD YTDELDVAKF RLEDMQNDGM VVLSENGVRV
TEIGIPFLRN ICMAFDARLW RSDSLSKAYN VSRDIQKTYI EKARQAKLAK ENHPG
|
|---|
| |