Gene Paes_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0580 
Symbol 
ID6459762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp620495 
End bp620965 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content51% 
IMG OID642724579 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_002015283 
Protein GI194333423 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0303842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.553094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGTTT GTCGCCACAA AGGCATTTTC ATTCATATTA ATCGTATCCC CATCATGAGT 
GTAACAAAAC TTGACAGGAA TTTTTTTCAG CGCCTTCTGG GTCTTCCGGC TACTCATAAG
CCGGTATCTC CAGACTGCTG GACGCTCCAG AACGGGACGG TAATGCTCGA TCTGTCGAAA
GTAACGGAAC TTTCCAAAGC CGGATCAGCG GTTCGCCTTG ATGGCAAAGG CCTTGAGCAC
TCTCTTCTTG TTGTTCACGG CGACGACGGC CGGTTTCATG CGTTGAAAAA TGTGTGTACG
CATGGCAAAC GACAGCTTGA TCCCGTTCCG GGCACAAGTA CGGTCCAGTG CTGCAGCATA
GGTGCATCGA CATTCTCCTA TGACGGCAAA CTGATCGAAG GGCCTGCAAA GGGACCATTG
ACCGTCTACA GGGTGGAGGA AGCGGATAAA ACCCTGAAGA TAGCGCTTTA G
 
Protein sequence
MLVCRHKGIF IHINRIPIMS VTKLDRNFFQ RLLGLPATHK PVSPDCWTLQ NGTVMLDLSK 
VTELSKAGSA VRLDGKGLEH SLLVVHGDDG RFHALKNVCT HGKRQLDPVP GTSTVQCCSI
GASTFSYDGK LIEGPAKGPL TVYRVEEADK TLKIAL