Gene Paes_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0570 
Symbol 
ID6459233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp613966 
End bp614712 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content49% 
IMG OID642724569 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002015273 
Protein GI194333413 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.320188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG GTTTATTTAC CGCAATCCTG ATCGCGATCA CCTATGCTGT TTCCCTGAGC 
TTTTATGTCT GGATGGGCAC GACCTCTCCG GATTCGATGT TTCACGCAGT CTATAAGGGA
GGCCCTGTCG TTTCTGTGCT AATGGCACTG ATCCTGATGG TGATCGCCTA CATTGTCGAG
CGAATCATTG CCCTCAACAA GGCGTCGGGA AAAGGAAATA TTGCGGAGTT TGTCAAAAGC
CTTAAATCGG ATGTCGATAA CGGGCAGATC GATTCGGCTA TTTCAAAATG CGATGATCAT
CAGAGTTCTC TTGCAGCAGT GATGCGGGCT GTGTTCGAGC GATACAAGGT GCTTTCCATT
CACCATGTTA CCGACAGGGA AAAGAAGATC AGCGAGATGG AAAAAGCGGT AGAGGAGGCG
ACCATCATGG AGATGCCGCT GCTCGAGAAA AATCTTGTGG CGATATCTAC GATTGCCTCT
ATTTCAACGA TGGTCGGTCT TCTCGGGACG ACCATGGGTA TGATCCGGGC GTTTACCGCG
ATGGCGACCA GCGGAGCCCC TGATGCGGTG CAGCTGTCTT TGGGTATTTC AGAAGCACTG
TTCAATACGG CACTGGGTAT TTTTGGCGGG ATTATCGGGA TTGTCACCTA CAATATTTTC
ACCCATAAAG TGGATGCGTT TACCTATGTG ATCGATGAGG CGGCATTCTA TATTATACAG
ACGCTCGGGT CCGCTAAATC AGAGTAG
 
Protein sequence
MKQGLFTAIL IAITYAVSLS FYVWMGTTSP DSMFHAVYKG GPVVSVLMAL ILMVIAYIVE 
RIIALNKASG KGNIAEFVKS LKSDVDNGQI DSAISKCDDH QSSLAAVMRA VFERYKVLSI
HHVTDREKKI SEMEKAVEEA TIMEMPLLEK NLVAISTIAS ISTMVGLLGT TMGMIRAFTA
MATSGAPDAV QLSLGISEAL FNTALGIFGG IIGIVTYNIF THKVDAFTYV IDEAAFYIIQ
TLGSAKSE