Gene Paes_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0561 
Symbol 
ID6458498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp603441 
End bp604040 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content52% 
IMG OID642724560 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002015264 
Protein GI194333404 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.305166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGATC TCTTGAACAC CGGAGGGCCG ATGATGTACC CGCTTCTGCT CGGCTCAATT 
CTCGTCGCAA CATTCGCTTT AGAACGAACG ATTCATTTTT TCAGGGCCTC TTCCGGCACG
CCTGCAGCTC GTCAAATACA TGCATTAATC GAAAACGGCC GAATTGAAAA TGCCCTGGCA
CTTGCCCAAC AGTCCCCTGG ACCTGTTGCA GCAGTACTTG AAGCAGGGTT GGCGCATGCC
GGAAAAAACA GGAAAGAGCT TGAAGAAGAA GTGATTCTGG TCGGCAACAG AGAAATCAAA
AGGCTCAACC AGCATCTTGA CCTGATCGAA CTCATCAGCC GCACCGCACC TCTTGTCGGC
ATCCTGGGAA CAGTTCTCGG CATGGTCACC GCATTTCAAA ACGTCGCCGA TGCAGGAGGA
TCAGCCAATC CGGCGATCCT TGCCAGCGGC ATATGGGAAG CCCTGCTGAC AACTGCAGCC
GGGCTTTCGG TAGCCATTCC AGCTATGATT GTACACCACC TCCTGGAGGA AAAAACCCAA
TCGCTATCCT TCAGCATGAA ACAATACGCC ACAGAAGCAA TCAAACACCT CGGAAAGTGA
 
Protein sequence
MWDLLNTGGP MMYPLLLGSI LVATFALERT IHFFRASSGT PAARQIHALI ENGRIENALA 
LAQQSPGPVA AVLEAGLAHA GKNRKELEEE VILVGNREIK RLNQHLDLIE LISRTAPLVG
ILGTVLGMVT AFQNVADAGG SANPAILASG IWEALLTTAA GLSVAIPAMI VHHLLEEKTQ
SLSFSMKQYA TEAIKHLGK