Gene Paes_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0560 
Symbol 
ID6460579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp603020 
End bp603433 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content49% 
IMG OID642724559 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002015263 
Protein GI194333403 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.326497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAT TCGACCAACC GATCAAAAAA CGCAGATGGC TCGACCTGGC CCCCATGATT 
GATGTCATTT TCCTGCTCTT GATCTTTTTC ATGCTGACCT CAATCTACGC CAAACCGGTC
ATACCGGTTG AGCTGCCGCA AGCCGGATCA AGCCAAGAAC AGGAAAAAAC AAGCATAGAT
ATCGTCATCG ACTCAAGCGG CTCAATGGCT ATCAACGGAA AGAGCACATC CGAAGAGATG
TTTGCACAAA CGCTTCTCGG CATGACAAAC AACCCGGAAA CAGCGTTCAT AACCCTCTAC
GCAGATCAAA ACATCAGCTT CGGCCGATTC CTCTCCATTA TGGACAAAAC ACGCTTATGC
GGCATCAACA ACGTGTCGAT CGCTACCATC AGACCGGGGG AACATGCACA ATAG
 
Protein sequence
MLEFDQPIKK RRWLDLAPMI DVIFLLLIFF MLTSIYAKPV IPVELPQAGS SQEQEKTSID 
IVIDSSGSMA INGKSTSEEM FAQTLLGMTN NPETAFITLY ADQNISFGRF LSIMDKTRLC
GINNVSIATI RPGEHAQ