Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0442 |
Symbol | |
ID | 6460210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 474552 |
End bp | 476555 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642724442 |
Product | hypothetical protein |
Protein accession | YP_002015146 |
Protein GI | 194333286 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.57789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATTTCT TATTGTTTTC CCGGCAGCGG AGCTGGCTTG CCATTGCTTT CTGCGCCCTG TTTTTGACCG TTCGGTTTTG TTTTGTCGCA CCGGCGTTTG CTGCCGACGA TCTTTCCATT CTTGCCGATC AGAGCGATAC TCCAGGTGAT GTTGAAGCAC TGCTCGAAGA GCTTTCTTTT CTTCAAGACC GAAAAATAGC CGTTAACGTC GCTGCTATCG ATGATCTGCT TGTGCTTCCC TTTCTTTCTC CGGCAGATGC ACAAAGGATT GTCGATTACC GGCGCACAAA AGGGCGTATA GGCGGCAAAG CTGATCTTGC GGAGATCGTT GGCGATGATG TTGCCGAGCA GATAGCCCCC TTTCTTGATT TCAGCCTTCT TAAAAAGAGT TTCCCCGGAG ATCCGGTTGC TGTTGAAGGG AAGTGGAGAA CCAGATGGTT TCAGGAGATA CCTCCTCGCA AGGGCATTGG CACCGGCGCG TATGCGGGCG ATAACTACAA GCTCTACAAC CGCATTCAGT TGAGCTATGG AGATATATTC ATCAGCGCTC TTCAGGAGAA AGATACAGGA GAACCTGATT TTGATGATTT TACGTCACTT TCGTTTAATC TTACCGGTCG CGGCTTGTTG CGGCAGCTGG TGGTAGGGAA TTTTACAGCG ACGACCGGTC AGGGGTTACT GCTCGGTCAG AGCCGCTATC TTTCAAAAGG GGTTCAGCCT CTCGACGTGA GCTTGAGGAA AGGCGCTTTG AAGCCCTATA CTTCAAGCAG CGAGAGCGGA TTTATGCAGG GTGCAGGTAT GGTGATTGGT TATGGCCCGA TCGAGATGAT GCTCTTTTAT TCGGACAATC TGGTCGATGC CTCGATTGAT GACGGGATGA TCACGACACT GCGTACATCG GGCTATCATC GTACCCTGAG TGAGCTAGAG CACAGGGATA ATATCAGCGA GCAGGTCGCC GGGTTCAACC TTCGTTATCT GATAGAGGAG GGTCCGGTGA GCGGGAGTGC CGGAGCGACC GTCATCAGCT ATCGTTACGA TCTGCCGTTT GAAGACGCGG GTGCTCACGA CGGCTGGTAC GATGCGGCAA GTCTTGATTT CAATCTTATG GCCGGGAGTG TCAACTTTTT TGGCGAGGCA GCCGTAACCG GTCGTGAAAG ATACCTGTCG TGGATAGCCG GTGCAGCAAT TCCATTGACG GCAACAATCG AGTCGGTGAT TGCCGTCAGG GATTACCACA GCAGGTATTT TTCACCCTTT GCCGGTGCTT TTGCCGAGAG AGCTGATGAC GGGGCCAATG AGGAGGGCTA TTATGTCGGC ATTGAGGCCA GGCTGTTGAA GAACCTTCGG GTTGGCGCAT ATTACGATAT TTTCAGGTTT CCGGAGCTGA GCAGTTATTA CGGGCTTCCT TCGACGGGTG ACGAGGCAAA AATTTTTCTG ACCTGGAAGC AGTCGCCATC GGTGACGCTC GACCTGCTCC TGCAGAACCA GTACAAGGAG AAAGCGAAAA AACTGGAGGA CCTTTCGGGG CTCGAATACT ACACGCTGGT TCCCCTCAAC GCCAACCGGG TCCGCCTGGA CCTCATTACC CGTCTTTCCC GGAGCCTGAC GATGAAGACG AGGGGCGAAG TGAAGTTCGT CGAAGGAACA TATCCCGACG AGACCGATCA CTCGAAAGGG TGGCTGCTTT ACGAACAGGC AGCCTGGCGG AAAGGGCCGC TGAAACTGAC AGCAAGATAC TCCAGGTTTC ACACCGAGAA CTTTGACTCA GCGATCTACG TCTACGAAAA CGACCTTCCA CTGGTGTTCA ACCTGAAGTC CTACTATGGC AGGGGAGAGG CCTTCTTCGC CCTGCTTTCG ATGGAGCTGA TGAAAAATTT CGACCTGTCG GCGCGCTACG AAAAAGCGTG GTACGCCAAT CGTGACGTCT ACAGCAGCGG CAACGACCTG AGGCCGACAA GCAGTCCGTC CTCGTGGCAT GTGGGGTGTG CGTTGCGGTT TTAA
|
Protein sequence | MHFLLFSRQR SWLAIAFCAL FLTVRFCFVA PAFAADDLSI LADQSDTPGD VEALLEELSF LQDRKIAVNV AAIDDLLVLP FLSPADAQRI VDYRRTKGRI GGKADLAEIV GDDVAEQIAP FLDFSLLKKS FPGDPVAVEG KWRTRWFQEI PPRKGIGTGA YAGDNYKLYN RIQLSYGDIF ISALQEKDTG EPDFDDFTSL SFNLTGRGLL RQLVVGNFTA TTGQGLLLGQ SRYLSKGVQP LDVSLRKGAL KPYTSSSESG FMQGAGMVIG YGPIEMMLFY SDNLVDASID DGMITTLRTS GYHRTLSELE HRDNISEQVA GFNLRYLIEE GPVSGSAGAT VISYRYDLPF EDAGAHDGWY DAASLDFNLM AGSVNFFGEA AVTGRERYLS WIAGAAIPLT ATIESVIAVR DYHSRYFSPF AGAFAERADD GANEEGYYVG IEARLLKNLR VGAYYDIFRF PELSSYYGLP STGDEAKIFL TWKQSPSVTL DLLLQNQYKE KAKKLEDLSG LEYYTLVPLN ANRVRLDLIT RLSRSLTMKT RGEVKFVEGT YPDETDHSKG WLLYEQAAWR KGPLKLTARY SRFHTENFDS AIYVYENDLP LVFNLKSYYG RGEAFFALLS MELMKNFDLS ARYEKAWYAN RDVYSSGNDL RPTSSPSSWH VGCALRF
|
| |