Gene Paes_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0362 
SymbolhisS 
ID6458741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp397468 
End bp398736 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content54% 
IMG OID642724360 
Producthistidyl-tRNA synthetase 
Protein accessionYP_002015066 
Protein GI194333206 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0124] Histidyl-tRNA synthetase 
TIGRFAM ID[TIGR00442] histidyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0779555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACT ATCGCGCCGT TAAAGGTACC AGAGATATTT TCCCCGATGA AGTTGCTGCA 
TGGCAGTATG TTGAAAGCGT TATTCATCGT GTTGCTTCGT TCTATGCGTT TCATGAGATC
AGGACGCCCG TTTTTGAATA CACCGATCTT TTTCAGCGCA GTATCGGCGC GACGACAGAT
ATCGTCGGCA AAGAGATGTT TACGTTTCAG CCTGATCCCA ACGGCCGATC GATAACGCTG
AGGCCGGAAA TGACCGCCGG AGTGATGCGC GCTTTTCTTC AGGGCAACCG TGCGTCGGAA
TCTCCGGTGC ACAAGCTCTA TTACATCAGC AACCTGTTTC GAAAGGAGCG CCCTCAGGCC
GGACGGCAGC GGCAGTTTTG CCAGTTCGGT GCTGAACTTC TCGGGGCTTC TTCACCTGCA
GCTGTGGCGG AGGTTATCGC TATGATGATG CATGTTTTCC GGCTGCTTGG ACTGAAGGGA
CTTAAACTCA GGATCAATAC GCTTGGCTCC ATTGAGGATC GTAAGCGTTA CCGCGATGCG
CTGCGGGAGT ATCTTCTGCC TTTTTCCGGT GAATTGGACG CAGCCTCTCT TGAACGTCTG
GAGAAGAACC CGCTGAGGAT TCTCGATTCT AAAAATCCTG CCGTGCAGAG TATCGTCTCC
GGCGCTCCTT CTTTGCGTGA TTATCTTCAG CCGGCAGCTG TTGAAGAGTT TGAAGAGGTT
CTCGGCTATC TTGATGATCG CGGTATCGAG TATGTTCAGG ACCCTTTGCT GGTAAGAGGG
CTTGATTATT ACTGCCATAC GGCATTTGAG GTTCAGTGTT CTGATCTCGG AGCTCAGGAT
GCGCTCGGCG GCGGTGGTCG TTACGACGGA CTTGCGCGTG AGCTTGGAGC CGGCGCTGAC
CTCCCTGCAG TCGGTTTTGC TGTGGGAATG GAGCGCCTCA TGATCGCGCT CGAACGTCAG
GGTCTGCTCT CAACGATTCC GCCCAAGGGT CCCGATGTGT ATGTGGTTCT GCAGGATCGT
GCGTTTCTGG TCCATGCTGT CGCACTATGC GGTGCTCTTC GTGACGCAGC AATCAGTACG
GAGATTGATC TTGCCGGGCG CAGCATGAAG GCCCAGATGC GTGAGGCCAA CAGGATTAAA
GCCGCTTATG CTTTGTTCGT CGGGCCTGAT GAAGTTGCAT CGGGGGTATA CGGATTGAAA
AACCTTGAGT CATCCAGTCA GGAATCGCGC TCTCTGGAGG CTGTTATCGC TGAGCTTGGG
CACGGTTAA
 
Protein sequence
MSHYRAVKGT RDIFPDEVAA WQYVESVIHR VASFYAFHEI RTPVFEYTDL FQRSIGATTD 
IVGKEMFTFQ PDPNGRSITL RPEMTAGVMR AFLQGNRASE SPVHKLYYIS NLFRKERPQA
GRQRQFCQFG AELLGASSPA AVAEVIAMMM HVFRLLGLKG LKLRINTLGS IEDRKRYRDA
LREYLLPFSG ELDAASLERL EKNPLRILDS KNPAVQSIVS GAPSLRDYLQ PAAVEEFEEV
LGYLDDRGIE YVQDPLLVRG LDYYCHTAFE VQCSDLGAQD ALGGGGRYDG LARELGAGAD
LPAVGFAVGM ERLMIALERQ GLLSTIPPKG PDVYVVLQDR AFLVHAVALC GALRDAAIST
EIDLAGRSMK AQMREANRIK AAYALFVGPD EVASGVYGLK NLESSSQESR SLEAVIAELG
HG