Gene Paes_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0354 
Symbol 
ID6459083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp389665 
End bp390702 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content52% 
IMG OID642724352 
Productglycosyl transferase family 9 
Protein accessionYP_002015058 
Protein GI194333198 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAG ACTGGAAAAA AAAGAGGCGC TTCCGCAAAG CCCTGGCTCG ATCCCTGCAA 
ATAATTTCAC GAAGAAATGA ACGTGTTCCG CCATACCAGG GCCCACTGCA TTCGATCGCT
ATACTTGCTC AGGAGAAATA CGGCGACGCG ATACTCCTGA CGCCATTGCT GAAAAATCTG
AAAATCCGCT TCCCCGAATG CCGTATCCAC CTGATCACCT TCAGCAAGGC ATCGACCGCT
TTTTTCCGAA ACGATCCGAA CGTCTGGGCA GTGCACTATG CAAAAGGCAA CCCAGCAGAC
TACCTGCAGG ACGTCCTTTT TCACCGGTTC GATCTTCTTT TCAATACCAA GGACCATCCC
TCGACGAATT TCCTCCTGCA GTCGCTTCTT GTTCGCGCAA AAAGCAAAGT CGGTATCGAC
AATGACTTTC ATCGGGGGTT GTTCGATTAC CTGATCAAAA CCGGTTTTCA CACCCACATC
GTGCGGAAAA ACTGTGCTTT GCTGGAAATA CTCGGGCAGC ACATCTCCGT CGAATCATGC
AGGCCGTACA TCCCTCCGAT GCCGGTTTCG GAAGAAATCG AAACCTTTTC GGCATCTCTC
CAACCCGGGA CCGTCGCAGG AATCAACATC AGCGCAGGCG GACCGACACG GTACTGGACT
GAAGAAAAAT GGTCGGAAGT CGTCAACAAT CATCCTTCCG TCCGTTTTGT GCTTTTCTCG
ACACCGGACG ACCTCGACCA GAAAAGGCAC CTCGAAGACC GGCACGCCAA CGTCATCGCG
TCGCCCCCGA CGGCGAACCT TTACGAAACA AGCCTGATCA TTGAAAAACT CATGCTGGTT
ATCTCTCCCG ATACCGCCAT GATCCATGCT GCATCATGCT GCAACGTACC GGTTGTAGGT
CTCTATGGCG TGGCAACTCA GGACCAGACA CGTTTCAGCC CGTTTCTCGT CCCCTATGAA
ATGGTCGTTT CGCCGACGGC TCATGTCAGG GACATCACCG TCAGGGCAGT AGAGGAAGCC
GTGCAGAAAT TCATCTGA
 
Protein sequence
MTRDWKKKRR FRKALARSLQ IISRRNERVP PYQGPLHSIA ILAQEKYGDA ILLTPLLKNL 
KIRFPECRIH LITFSKASTA FFRNDPNVWA VHYAKGNPAD YLQDVLFHRF DLLFNTKDHP
STNFLLQSLL VRAKSKVGID NDFHRGLFDY LIKTGFHTHI VRKNCALLEI LGQHISVESC
RPYIPPMPVS EEIETFSASL QPGTVAGINI SAGGPTRYWT EEKWSEVVNN HPSVRFVLFS
TPDDLDQKRH LEDRHANVIA SPPTANLYET SLIIEKLMLV ISPDTAMIHA ASCCNVPVVG
LYGVATQDQT RFSPFLVPYE MVVSPTAHVR DITVRAVEEA VQKFI